Pseudomonas chlororaphis subsp. aurantiaca: JM49_02770
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Entry
JM49_02770 CDS
T03338
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00260
Glycine, serine and threonine metabolism
pcp01100
Metabolic pathways
Module
pcp_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JM49_02770
Enzymes [BR:
pcp01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
JM49_02770
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
JM49_02770
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_binding_2
FAD_oxidored
DAO
NAD_binding_8
HI0933_like
GIDA
Pyr_redox_3
FAD_binding_3
Thi4
Pyr_redox
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AIS10632
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All DBs
Position
606303..609320
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AA seq
1005 aa
AA seq
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MSQSNRLSNGGRIDRNKVLSFTFNGQTYKGFEGDTLAAALLANGVDIIGRSFKYSRPRGI
FAAGAEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPNVNNDMMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDTYDYMNQHCDVLIVGAGP
AGLAAALAAARSGARVILADEQEEFGGSLLDSRESLDGKPAAEWVATVVAELKSLPDVTL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRQRIHRVRAKRVVLATGACERPLVYG
NNDVPGNMLAGAVSVYVRRYGVAPGKKLVLSTNNDHAYRVALDWLDASLQVVAIADARHN
PRGALVEEARAKGIRILTSSAVIEARGSKHVTGARVAAIDVKAHKVTSPGEWLDCDLIAS
SGGYSPVVHLASHLGGKPIWREDILGFVPGEAPQKRVCVGGINGVYSLGDSLADGFEGGV
RAASEAGFKAVEAVLPKALSRLEEPTLALFQVPHEKGTARAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVSIPQMGTTMFRPNYTPVTF
GAVAGRHCGHIFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPKNGEDLHAAVKRECKA
VRDSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACVGENHFIMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATMTLSGPNSRKL
LSEVTDIDLDKDGFPFMTWKEGLVGGVPARVFRISFTGELSYEINVQADYAMGVLEQIVE
AGKKYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDCVRDQRKQLVGLKPIDPNQWLPEGAQLVFNTKQAIPMSMVGHVTSSYAHNSLGYSF
AMGVVKGGLKRMGERVFAPLADGTVIEAEIVSSVFFDPKGDRQNV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtccaatcgcctgtccaacggcggacgcatcgaccgcaacaaagtcctcagc
ttcaccttcaacggccagacctacaagggcttcgaaggcgacaccctggccgccgccctg
ctggccaatggcgtggacatcatcggtcgcagcttcaagtattcccggccgcgcggcatc
ttcgccgccggtgccgaagagccgaacgcggtgctgcagatcggcgccaccgaagccacc
cagatccctaacgtgcgcgccacccaacaggcgctgtaccagggcctggtcgccaccagc
accaacggctggccgaacgtcaacaacgacatgatggggattctcggcaaggtcggcggc
aagctgatgccgccgggcttctactacaaaaccttcatgtacccgcaatcgttctggatg
acctacgagaagtacatccgcaaggccgcgggcctgggtcgctcgccgaccgagaacgat
ccggacacctacgactacatgaaccagcactgcgacgtgctgatcgtcggcgccggcccg
gccggcctggccgcggccctggctgccgcgcgcagcggtgcgcgggtgatcctcgccgac
gagcaggaagaattcggcggcagcctgctggacagccgcgaaagcctggacggcaagccg
gcggccgagtgggtcgccaccgtggtcgccgagctgaagtcgctgccggacgtgaccctg
ctgccacgggccaccgtgaacggctaccacgaccataacttcctgaccattcacgagcgt
ctgaccgaccacctcggcgatcgcgcgccgatcggccaggtgcgccagcgcatccaccgg
gtacgtgccaagcgcgtggtgctggccaccggtgcctgcgagcgtccgctggtctacggc
aacaacgacgtgccgggcaacatgctggccggcgcggtttcggtctacgtgcgccgctac
ggcgtggcgccgggcaagaagctggtgctgagcaccaacaacgaccatgcctaccgtgtg
gccctggactggctcgacgccagcctgcaagtggtggccatcgccgatgcccgtcacaac
ccacgcggcgcgctggtggaagaagcccgcgccaagggcattcgcatcctcacctccagt
gcggtgatcgaagcccgtggcagcaagcatgtgaccggcgcccgcgttgcggcgatcgac
gtcaaggcgcacaaagtcaccagcccgggcgagtggctggactgcgacctgattgccagc
tccggcggctacagcccggtggtgcacctggcgtcgcacctgggcggcaagccgatctgg
cgtgaagacatcctcggtttcgtaccgggcgaagcaccgcagaaacgtgtgtgcgtcggt
ggcatcaacggcgtctacagcctcggcgattccctggccgatggtttcgaaggcggcgtg
cgcgcggccagcgaagcgggcttcaaggccgtggaagcggtcctgcccaaggccctgagc
cgtctggaagaaccgaccctggcgctgttccaggtgccccatgaaaagggcaccgcgcgg
gcacccaagcaattcgtcgacctgcagaacgacgtcaccgccgccgccatcgaactggcg
acccgcgagggcttcgagtcggtcgagcacgtcaagcgctacaccgcgctgggcttcggt
accgatcagggcaagctcggcaacgtcaacggcctggccatcgcggcccgttcgctgaac
gtgagcatcccgcagatgggcaccaccatgttccgtccgaactacacgccggtgactttc
ggcgccgtggccggtcgtcactgcgggcacatcttcgagccggtacgcttcaccgcgctg
catgcgtggcacgtgaagaatggcgccgagttcgaggacgtcggccagtggaagcgccct
tggtacttcccgaagaacggcgaagacctgcacgccgcagtcaagcgcgagtgcaaggcg
gtgcgtgacagcgtcggcctgctcgacgcctcgaccctgggcaagatcgatatccagggc
ccggacgcccgtgagttcctcaaccgcatctacaccaacgcctggaccaagctcgacgtg
ggcaaggcgcgctacggcctgatgtgcaaggaagacggcatggtcttcgacgacggcgtg
accgcctgcgtcggcgagaaccacttcatcatgaccaccaccaccggtggcgccgcgcgc
gtcctgcaatggctggagatctatcagcagaccgaatggccggacctcaaggtgtacttc
acctcggtcaccgaccactgggcgaccatgaccctgtccgggccgaacagccgcaagctg
ctcagcgaagtcaccgacatcgacctggacaaggacggcttcccgttcatgacctggaaa
gaaggcctggtgggcggcgtgccggcgcgggtgttccgtatctccttcactggtgagctg
tcgtacgaaatcaacgtccaggccgactacgccatgggcgtgctggagcagattgtcgag
gctggcaagaagtacaacctgaccccgtacggcaccgaaaccatgcacgtactgcgggcc
gagaagggcttcatcatcgtcggccaggacactgacggctcgatgaccccggacgacctg
aacatgggctggtgcgtcggtcgtaccaagccgttctcgtggatcggctggcgtggcatg
aaccgcgaagactgcgtgcgcgaccagcgcaagcaactggtgggcctgaagccgatcgac
ccgaaccagtggctgccggaaggcgcgcaactggtgttcaacaccaagcaggcgatcccg
atgagcatggtcggtcacgtgacctccagctatgcccacaactccctggggtattcgttt
gccatgggtgtggtcaagggcggcctgaagcggatgggcgagcgggtattcgcgccattg
gccgacggcacggtgatcgaggcggaaatcgtttcttcggtgttcttcgatccgaaaggc
gatcgccagaacgtttaa
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