Pseudomonas citronellolis: PcP3B5_47180
Help
Entry
PcP3B5_47180 CDS
T04637
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcq
Pseudomonas citronellolis
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcq03009
]
PcP3B5_47180 (rimO)
Enzymes [BR:
pcq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PcP3B5_47180 (rimO)
Ribosome biogenesis [BR:
pcq03009
]
Prokaryotic type
ribosomal protein modification factors
PcP3B5_47180 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
RNase_II_C_S1
DUF4249
Motif
Other DBs
NCBI-ProteinID:
AMO78107
LinkDB
All DBs
Position
5220198..5221520
Genome browser
AA seq
440 aa
AA seq
DB search
MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYEDADVVVVNTCGFIDSAKAE
SLDAIGEAIAENGKVIVTGCMGVAEDSIRDVHPSVLAVTGPQQYEQVVSAVHEVVPPRAE
HNPLVDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLSEAQRL
VKAGVKELLVISQDTSAYGVDLKYKLDFWDGQPVKTRMLELCEALSSMGVWVRLHYVYPY
PNVDDVIPLMAQGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKKWRELCPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLESVPDDVKQERW
ERFMAHQQAISAARLQLKIGKEIEVLIDEVDAEGAVGRSWADAPEIDGAVYIDTFDVKPG
DKVRVRITDADEYDLWAELA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgcaacgcccaaagtcggtttcgtcagcctcggttgccccaaggcaacggtc
gactccgaacgcatcctcacccagctgcgcatggagggctacgagatcgtgcccacctac
gaggacgccgacgtcgttgtggtgaacacctgcggcttcatcgacagcgccaaggccgag
tctctggacgccatcggcgaggccatcgccgagaacggcaaggtcatcgtcaccggctgc
atgggcgtggccgaggacagcatccgcgacgtgcaccccagtgtgctggccgtgaccggc
ccgcagcagtacgagcaggtggtcagcgccgtgcacgaggtggtgccgcccagggccgag
cacaatccgctggtcgacctggtgccgccgcagggcatcaagctcaccccgcgccactac
gcctacctgaagatttccgagggctgcaaccacagctgcagcttctgcatcatcccgtcg
atgcgcggcaagctggtcagccgcccggtgggcgacgtgctcagcgaggcccagcgcctg
gtcaaggccggcgtcaaggaactgctggtgatctcccaggacaccagcgcctacggcgtg
gacctgaagtacaagctggacttctgggacggccagccggtgaagacgcgcatgctggag
ctgtgcgaagctctgtcgagcatgggcgtgtgggtgcgcctgcactacgtctacccctac
cccaacgtcgacgacgtcatcccgctgatggcccagggcaagctgctgccctacctggac
atccccttccagcacgccagcccgaaagtgctcaagtccatgaagcgcccggccttcgag
gacaagaccctggcgcgcatcaagaagtggcgcgagctctgccccgagctgaccatccgc
tcgaccttcatcgtcggcttccccggcgagaccgaggaagacttccagtacctgctcgac
tggctgaccgaagcccagctcgaccgcgtcggctgcttccagtactccccggtggaaggc
gccccggccaacgacctgggcctggagtcggtgcccgatgacgtcaagcaggagcgctgg
gagcgcttcatggcgcaccagcaggcgatttccgccgcgcgcctgcagctgaagatcggc
aaggaaatcgaagtgctgatcgacgaagtggacgccgaaggcgcggtgggccgttcctgg
gccgacgctccggagatcgacggcgccgtctacatcgataccttcgacgtgaagccgggc
gacaaggtgcgcgtgcgcatcaccgatgccgacgagtacgatctctgggccgagctggcc
tga
DBGET
integrated database retrieval system
