Pseudomonas citronellolis: PcP3B5_52380
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Entry
PcP3B5_52380 CDS
T04637
Symbol
cph2_12
Name
(GenBank) Phytochrome-like protein cph2
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PcP3B5_52380 (cph2_12)
Enzymes [BR:
pcq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PcP3B5_52380 (cph2_12)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
FtsL
Motif
Other DBs
NCBI-ProteinID:
AMO78621
LinkDB
All DBs
Position
5823080..5825152
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AA seq
690 aa
AA seq
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MKLDPRHRLSLKLLRVVLLAALVVGVVLSCAQIVFDAHKARQAVHNDAQRILAMVRDPST
QAVYSLDRDMAMQVLEGLFQHEAVRYAAIGHPDEPMLAEKSRPLLDSPTRWLTDPILGPE
QHYAIRLVGRGEPGEYYGDLKITLDTAPYGQDFVVTSVIIFLSGILRALAMGLVLFLVYH
WLLTKPLWRIIDHLTSINPDRPGEHKLPMLAGHEHNELGLWINTANQLLESIERNGHLRR
EAENSLLRISQYDFLTGLPNRKLLQQRLDQILADAGREERRVAVLCLGLDDFKGINEQHG
YQFGDQLLIALADRLRGHSAQLGALARLGGDQFALVQADIEQPYEAAELAQQILDDLELP
FQLDEQPVQLRATIGITLYPEDGESTEKLLQKAEQTMTLAKTRSRNRYQFYIASVDSEMR
RRRELEKDLREALSRNELHIVYQPQVDYRDHRVVGVEALLRWQHPTQGWVAPDLFIPLAE
QNGSIFSIGEWVLDQSCKQLREWHDQGFDDLRLAVNLSTVQLRHNALPRVVSNLLQIHRL
PPRSLELEVTETGLMEDISTAAQHLLSLRRAGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLQDDDDATIVRAIIQLGKSLGMQVIAEGVETLEQEAYIIDQGCHEGQGYLYS
KPLPARELTLYLKQARRLAEAAGSSSIERR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactggacccccggcacaggctctccctcaagctgctgcgcgtcgtattgctcgcg
gcgctggtggtgggtgtcgtcctgagttgcgcgcagatcgtcttcgacgcccacaaggcg
cggcaggcggtgcacaacgatgcccagcggatcctcgctatggtccgcgacccgtccacc
caggcggtctacagcctggaccgcgacatggccatgcaggtgctcgaaggcctgttccag
catgaagcagtgcgctacgccgccatcggccaccccgacgaacccatgctggcggagaaa
tcccgcccgctgctggactcccccacccgctggctcaccgaccccatcctcggccccgag
cagcactatgccatccgcctggtcggccgcggcgagcccggcgaatactacggcgacctg
aagatcaccctggacaccgcgccctacggccaggacttcgtggtcacctcggtgatcatc
ttcctctccggcatcctccgcgccctggccatgggcctggtgctgttcctggtctaccac
tggctgctgaccaagccgctgtggcgcatcatcgaccacctcaccagcatcaaccccgac
cgccccggcgagcacaagctgccgatgctggccggccacgagcacaatgaactggggttg
tggatcaacaccgccaaccagttgctggaatccatcgagcgcaacggccacctgcgccgc
gaggcggagaacagcctgctgcgcatctcccagtacgacttcctcaccggcctgccgaac
cgcaagctgctgcagcagcgcctggaccagatactcgccgacgccggccgcgaggagcgc
cgcgtggcggtgctgtgcctgggcctggacgacttcaagggcatcaacgaacagcacggc
taccagttcggcgaccagttgctgatcgccctggccgaccgcctgcgcggccacagcgcc
cagctcggcgccctggcgcgcctgggcggcgaccagttcgccctggtccaggccgacatc
gagcagccctacgaggcggcggaactggcccagcagatcctcgacgacctggagctgccc
ttccagctcgacgagcagccggtgcagctgcgcgccaccatcggcatcaccctctacccc
gaggatggcgagagcaccgagaagctgctgcagaaggccgagcagaccatgaccctggcc
aagacccgctcgcgcaaccgctaccagttctacatcgccagcgtcgacagcgagatgcgc
cgccgccgcgagctggagaaggacctgcgcgaggcgttgtcgcgcaacgagctgcacatc
gtctaccagccgcaggtggactaccgcgaccaccgcgtggtcggcgtcgaggccctgctg
cgctggcagcacccgacccagggctgggtcgcgccggacctgttcatccccctggccgag
cagaacggcagcatcttctccatcggcgaatgggtgctcgaccagtcctgcaagcaactg
cgcgaatggcacgaccagggcttcgacgacctgcgcctggcggtcaacctgtccaccgtg
cagctgcgccacaacgccctgcccagggtggtcagcaacctgttgcagatccaccgcctg
ccgccgcgctcgctggagctggaagtcaccgagaccggcctgatggaagacatctccacc
gccgcccagcacctgctcagcctgcgccgcgccggcgcgctgatcgccatcgacgacttc
ggcaccggctactcctcgctcagctacctgaagagcctgccgctggacaagatcaagatc
gacaagagcttcgtccaggacctgctgcaggacgacgacgacgccaccatcgtccgggcc
atcatccagctgggcaagagcctgggcatgcaggtcatcgccgagggcgtggagaccctc
gagcaggaggcctacatcatcgaccagggctgccacgaggggcagggctacctgtacagc
aagccgctgccggcgcgcgagctgaccctctatctgaagcaggcgcggcgcctggccgag
gccgccggcagctccagcatcgaacgccgctga
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