Penicillium rubens: N7525_007095
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Entry
N7525_007095 CDS
T01091
Name
(RefSeq) Pre-mRNA cleavage complex II Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pcs
Penicillium rubens
Pathway
pcs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
N7525_007095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcs03019
]
N7525_007095
Enzymes [BR:
pcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
N7525_007095
Messenger RNA biogenesis [BR:
pcs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
N7525_007095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
ATP_bind_1
AAA_35
nSTAND3
AAA
AAA_24
AAA_28
Motif
Other DBs
NCBI-GeneID:
8313610
NCBI-ProteinID:
XP_061068341
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MSLPGLELTQPSEERSQVPAPPSQISLNPGSEWRFEVAFGHIIKVKLLNGTAELFGTELA
ESQTYTFTGTKAAIFTWHGCALEITAVETASTTSDGVTSTAGNGAGGCQSEYTAEETPMV
EYANVHFALETMREEAQSIGKDGPRVLLLGPENTGKTSLAKILTAYATKIGRQPLVVNLD
PTEGMLGVPGTLTATAFRTILDVEDGWGSSPMSGPSPVPVKLPLVYSYPMQSPLDGEGTV
YQPVVSRLALSVTGRMAEDEDARETGVIVDTPGILSTDKPGTMELINHIVTEFSITTILV
LGSERLYSTVAKQYDNKPSSSATAAVFDEHISVVKLSKSGGCVDRDNAFRKATRESQIRS
YFFGNPIPSLSPSSAITLSPHAQQLDFASLPVYNYTVSSADDEDEDEYDPSQLGTGASFL
PGGDGMDDYASETKQEPDRAAPLPGVVGSFSEPADNVNPNANAGSSSSIPLKKVLPPAPS
ALANTLLAVTHAPATASPAEVRDASIMGFLYVADVDADKGKIRVLAPVGGRMPPRAIIWA
KRWPGELVGLVG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttccgggtctcgagctaacgcagccctcggaggagaggtcacaggtacctgca
ccaccatcacagattagcctgaaccctggttcggagtggcggtttgaggtcgcctttgga
catattatcaaagtaaagcttctcaatggaaccgccgaactcttcggcacagagcttgcc
gaatcacaaacatacacattcacgggcacaaaggcggcaatcttcacgtggcatggctgt
gcacttgaaatcactgcagttgagacggcatcaaccacatccgacggagtcacatcgaca
gcaggtaacggcgcaggaggttgtcaaagcgaatacacggcggaggagacgccaatggtg
gaatatgcgaatgtgcactttgcgctagagacaatgcgcgaagaagcccagtcaataggc
aaggacggcccacgcgtgctcctcctgggtcctgaaaatacaggaaaaaccagtttggct
aagatcttgaccgcgtatgcgacgaagatcggccgtcaaccgttggtcgtgaacctcgat
cctacggagggtatgcttggcgtccctggcacactgaccgcgactgccttccgtaccatc
ttggatgtcgaagatggctggggaagcagtcccatgtccgggcccagccccgtgcctgtc
aagctgccgcttgtatacagttatccgatgcaaagcccgctggatggcgaaggcactgtg
taccaaccagtcgtctcgcgcctagcactgtctgtcacgggccggatggccgaagatgag
gacgcgcgcgaaacaggagtcattgtcgatacgcccggaatacttagcacagataagccc
ggcactatggaactcattaaccacattgttacggaattttcaatcacaacaatcctggta
ctgggctcggagcgcctgtacagcaccgttgccaaacagtacgacaacaagcccagctcc
agtgcaacagccgctgtcttcgacgagcacatttccgtcgtcaagctttctaaatcgggt
ggttgtgttgaccgcgacaatgccttccgcaaggcaacgcgggagtcccaaatccgttcc
tacttcttcggcaaccccatcccctccttgtcaccctcttccgccatcaccctctccccc
cacgcacaacaactcgacttcgcctccctccctgtatacaactacaccgtctcctcagca
gacgacgaagacgaagatgagtacgacccctcccagctgggaacaggcgcctctttcctc
cctggcggcgacggcatggacgactacgcctcagaaacaaagcaagagccagaccgcgca
gccccgctccctggtgtcgtgggctcattctcagagcccgctgacaatgtgaaccctaat
gccaacgccggcagcagcagcagcatcccgctgaagaaagtgcttccacccgctccctct
gctctggcaaatacgctcctcgcagtcacccatgcacctgccacggcatcccccgctgaa
gtccgtgacgcgagcatcatgggcttcttgtatgtcgccgacgtcgacgcggataaggga
aagatccgtgtgcttgcgcctgttggtgggagaatgcctccacgcgccatcatatgggca
aagcggtggcctggggagttggtggggttggtgggttag
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