Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1033
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Entry
PC1_1033 CDS
T00934
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00730
Thiamine metabolism
pct01100
Metabolic pathways
pct01240
Biosynthesis of cofactors
pct04122
Sulfur relay system
Module
pct_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PC1_1033
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PC1_1033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pct03016
]
PC1_1033
Enzymes [BR:
pct01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
PC1_1033
Transfer RNA biogenesis [BR:
pct03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PC1_1033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ACT12082
UniProt:
C6DB40
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All DBs
Position
1203877..1205325
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDESQR
SAIRDALTRIPGIHHILEVEDHAYTDVHNIFEQALALYREQLEGKTFCVRVKRRGKHEFS
SQDVERYVGGGLNQHIETARVNLTAPQVTVHLEIEQDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFI
AIDFDPVVGEILEKVDDGQMGVVLKRMMVRAASKIAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKQARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EAEESHFDFAILERVVSEARNIDIRQIAEQTKQEVVEIETVASFAPTDVLLDIRSPDEQD
DKPLELDQIEIKSLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFSNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcgattg
cgctttatcaagattctaaccggaaacattcgcaacgtattaaaacactatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgaagttcgggccaaagacgaaagccagcgt
tcggcgattcgtgatgcgttgacgagaattccgggtatccaccatattctggaagttgaa
gatcacgcctataccgatgtgcacaatatctttgaacaggcgctggcgctatatcgcgag
caactggaaggcaaaacgttttgtgtacgagtgaaacgccgcggtaagcatgagtttagt
tcacaggacgtcgaacgctacgtcggcggcggtctgaaccagcacattgaaacggcgcgg
gtcaaccttacagcaccgcaggttaccgtgcatctggaaatcgagcaggaccgtttgctg
ctgattaaaggacgttatgaagggatcggcggcttcccgatcggtacgcaggaagatgtg
ctgtcgttgatttccggtggttttgactccggtgtatccagctacatgctgatgcgtcga
gggtgtcgtgtgcattattgtttcttcaatcttggtggtgcggcacatgagattggtgtg
aaacaggtagcgcactatctgtggaaccgttttggtagctcgcaccgggtgcgttttatt
gctatcgacttcgatcctgtggtgggtgaaattctggagaaggttgacgacggccagatg
ggcgtcgtattgaagcgcatgatggtgcgtgcggcctccaaaattgctgagcgttacggt
gttcaggcgctggtgaccggtgaagcgttagggcaggtttccagccagacgttgaccaat
ctacgtttgatcgataatgcctctgatacgctgattctacgtccgctgatttctcatgat
aaagaacacattatcaaacaggctcgcgaactgggaacggaagatttcgccaaaacgatg
ccggaatactgcggtgtgatctcgaaaagcccgacggtgaaggcggtaaaagcgaagatt
gaggctgaagaaagtcactttgattttgccattctggagcgtgtggtgagcgaagcgcgg
aatattgatatccgtcagatcgccgagcagaccaagcaagaagtggttgaaatcgaaacg
gtcgcgtcattcgccccaactgacgtactgctggatatccgctcgccggatgaacaggac
gataagccgcttgagcttgatcagatcgaaatcaaatccttaccgttctacaagttgggt
acgcagtttggcgatttggatcagagcaaaacctatctgctttactgcgagcgtggcgta
atgagccgcttgcaggcgctgtacctgcgcgagcaaggctttagcaatgtgaaggtctac
cgaccgtaa
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