Psilocybe cubensis (magic mushroom): JR316_0000589 Help Entry JR316_0000589     CDS       T08288                                  Name (RefSeq) DNA-dependent RNA polymerase II   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism pcub  Psilocybe cubensis (magic mushroom) Pathway pcub03020   RNA polymerase pcub03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pcub00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     JR316_0000589   09124 Replication and repair    03420 Nucleotide excision repair     JR316_0000589  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pcub03021]     JR316_0000589    03400 DNA repair and recombination proteins [BR:pcub03400]     JR316_0000589 Enzymes [BR:pcub01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      JR316_0000589 Transcription machinery [BR:pcub03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      JR316_0000589 DNA repair and recombination proteins [BR:pcub03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       JR316_0000589 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 MRNIP Motif Other DBs NCBI-GeneID:  71966910 NCBI-ProteinID:  XP_047754149 LinkDB All DBs Position 1:complement(1889745..1893899) Genome browser AA seq 1225 aa AA seqDB search MVQDPEATQDTYYEDDTYGMEEDEEAYAEITQEDCWTVISSFFEQKGLVRQQLDSFDEFV QNTMQELVDENSDLILDQADQHSGHDTDMTRRYEIKFGQIYLSRPTVTETDGSVVPVFPQ EARLRNLTYSAPLYIEMKKKVMIGREDPNGIPGDIVWTQEHEENPQDTTKVWIGKVPIML RSTFCILRGLQDQDLYDLNECPYDSGGYFIINGSEKVLIAQERMATNHVYVFAKAQPSPI NFLAEIRSAVERGGKTISQFQVKMFHRNQDRSLGNVMKATIPYIKVDIPIWVVFRALGVI SDRDILEHICYDMQDSQMLEMLKPCIDDGFVIQDREVALDFIGNRGTTTGLPRDRRIRYA QEILQKEMLPHVSMGEGSESKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPL LANLFRMLFRKLTKDVYRYLQKCVETHKEFNLALAVKHQTITNGLKYSLATGNWGDQKKS MSSKAGVSQVLNRYTYASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQA CGLVKNLALMSCISVGSLSAPVVEFLEEWGLESLEENAHSSTPCTKVFVNGVWMGVHRDA ANLVKTLKKLRRRDDISPEVSIVRDIREKELRLYTDAGRVCRPLFIVEKQQLSLQKKHVR WLSNGLNDDGEEYKWEHLIKTGVVELLDAEEEETVMISMTPEDLENSRNQQAGIDTQTNE GEFDPAARLKAGTHAHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGI YLTNFLIRMDTMANILYYPQKPLATTRSMEYLKFRELPAGQNAIVAILCYSGYNQEDSVI MNQSSIDRGLFRSIYYRSYMDLEKKSGVTLLEEFQKPTRENTLRLKHGTYDKLEDDGFIA PGTGVAGEDIIIGKTAPIPPDSEELGQRTRTHTRRDVSTPLKSTESGIVDQVLLTTNSDG LKFVKVRVRSTRIPQIGDKFASRHGQKGTIGITYRQEDMPFTSEGIVPDIIINPHAIPSR MTIGHLVECLLSKVATLIGNEGDATPFTDLTVESVSTFLRQKGYQSRGLEVMYHGHTGRK LQAQVYLGPTYYQRLKHMVDDKIHSRARGPVQILTRQPVEGRSRDGGLRFGEMERDCMIS HGIAGFLKERLFEASDAYRLHVCDICGLTAIANLKKQSFECRACKNKTACSQLYIPYAAK LLFQELQSMNIAPRLYTVSSGRIRG NT seq 3678 nt NT seq  +upstreamnt  +downstreamnt atggttcaagatcctgaggctacgcaagatacctactatgaagatgacacctatggtatg gaggaagatgaagaggcatatgcagagataacacaagaggactgctggactgtcatctca agttttttcgagcaaaagggtctagttcgccagcaattagattctttcgatgaattcgta cagaataccatgcaggaactcgtggacgaaaactctgatttgatactggaccaagcagat cagcattctgggcatgatactgacatgactcgtcgatacgaaatcaagtttggacaaatt tacctttcacgtccaacagtcaccgaaaccgatggctcagtcgttcccgtatttccacag gaagctcgcttgcgtaacctgacgtattcagcacccctctacattgaaatgaagaagaaa gtgatgattggtcgagaggatcccaatggaattccgggggatatcgtctggacacaagaa cacgaggagaacccccaggatacgactaaagtatggattggcaaggttcctatcatgctt cggtcaactttctgcattctacgaggacttcaagatcaagacttatacgacttgaacgag tgcccatatgactccggaggttatttcatcatcaatggatctgagaaggtcttgattgca caagaacgcatggctacaaaccatgtctatgtttttgcaaaagcgcaaccgtcacctatc aattttcttgccgagattcgtagtgctgtagagaggggaggaaaaacaattagtcagttc caggtgaagatgttccacaggaatcaagatcgttcgctcgggaacgtcatgaaagcaact ataccttatatcaaagtggatatacctatctgggtcgttttccgtgccctgggtgtcata tccgatcgcgacatcctggaacacatttgttatgatatgcaagattcgcaaatgctagaa atgctcaagccttgtatcgatgacggctttgtcattcaagacagggaggttgccctggat ttcatcggtaatcgtggaactactacaggtcttccccgcgatcgccgaattcggtatgca caagaaattcttcagaaggagatgcttccccacgtctctatgggtgaaggttctgagtca aagaaggcttatttcttcggctacatgatccatcgtctcttgcttgcggcccttgaacga agagaactagatgatcgtgatcattttggaaagaaacgacttgacttggctggccctcta cttgccaaccttttccgtatgctcttccggaagttgacaaaagatgtttaccggtacctg cagaagtgtgtcgaaacccataaagagttcaatcttgctttggccgttaaacaccagact atcactaatggtttgaagtactccttggccactggaaattggggagatcagaaaaaatct atgtcgtccaaggccggtgtatcacaggtgctcaatcggtacacgtatgcatcgacactg tcacatctacgtcggtgtaacactccactggggcgcgaaggcaaaattgccaaacctcgt cagctacacaacactcattggggtatggtctgccctgctgaaactccagaaggacaggct tgcggattggtgaaaaatcttgcattgatgtcatgtatctccgtcggttcattgtcggca cctgttgtcgaatttttggaagaatggggtcttgaatcgctggaggaaaatgcacattct tcgacaccttgcacaaaggtctttgtaaacggtgtttggatgggtgtgcatcgcgatgct gctaatctagtcaaaactctcaagaaactaaggcgaagagatgatattagccctgaagtt tcaatcgtacgcgacattcgagaaaaggaactacggttgtatacagatgctggtcgagtc tgcaggccccttttcatcgtagagaaacaacaattgtctctgcaaaagaagcatgttaga tggctcagcaacggccttaatgacgatggagaggaatacaaatgggagcatctgataaaa acaggtgtcgtggaattgttagatgcagaagaagaggaaaccgtcatgatatcgatgact ccagaggaccttgagaattcgcgcaatcagcaagctggtattgacactcaaacgaacgaa ggagagtttgaccccgcagctcgactgaaagccggtactcatgctcacacctggacacat tgtgagattcaccccagtatgatacttggtatttgcgctagcatcatcccattcccagac cacaatcaatctcctcgcaatacatatcaatctgctatgggcaaacaagctatgggtata tacctaacgaatttcttaattcgcatggatacaatggccaatatcctatattatcctcaa aaacctttggcgacaacacgttcaatggaatacctgaaattccgagaactccctgctgga cagaacgctatcgttgccattttatgctatagtggctacaaccaagaagattccgtcatt atgaatcaaagctctattgatcgtggccttttccgaagtatctattacagaagctacatg gatctcgaaaagaaaagtggtgtaacacttctagaagaatttcagaaacccactcgagaa aataccctgcggcttaaacatggaacgtacgacaaacttgaagatgatggatttattgct ccgggaacaggtgtcgctggcgaagatatcatcatcggcaaaaccgcgcctataccaccc gatagcgaagaacttggccagcgaacgaggactcatactcgtagagatgtctcaacccct ctgaagagtacggaaagcgggattgtagatcaggtgcttctgaccaccaattctgatggc ctgaaattcgtcaaagttcgagtcagatctactcgtatccctcaaattggagataaattt gcgtctcgccatggtcaaaagggtacaattggtattacctatcgccaggaagacatgcca tttacatcagaaggcattgtccctgatattatcattaacccgcacgctataccctctcgt atgaccattggccatttggtcgaatgtcttctgtcgaaagtcgctacgcttattggaaac gagggtgatgcgacgccatttacggatcttactgtcgaatcggtttctacatttttgcgt cagaaaggttatcaatctcgtggactggaggtcatgtaccacggtcatacaggtcgcaaa cttcaagctcaggtctaccttggaccaacttactatcaacgtctcaagcacatggtggat gacaagatccattctcgtgctcgtggccctgtacagatcctgacacgccaacctgtagag ggtaggagtcgtgacggtggcctccgcttcggagagatggaacgtgattgtatgatctcc catggtattgctggattcctgaaggagcgtctatttgaggctagtgatgcttatcgactc catgtttgtgatatttgtggtctgacagctatcgccaatcttaaaaagcaaagcttcgaa tgtcgagcttgcaagaacaaaaccgcttgctcgcagctatacattccatatgctgccaaa ttacttttccaggaattacaaagtatgaacattgcccctcgtctgtatactgtgtcttcg ggacgcatacgcggttag

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