Pectobacterium odoriferum: BCS7_08370
Help
Entry
BCS7_08370 CDS
T03424
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcv03009
]
BCS7_08370 (rimO)
Enzymes [BR:
pcv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BCS7_08370 (rimO)
Ribosome biogenesis [BR:
pcv03009
]
Prokaryotic type
ribosomal protein modification factors
BCS7_08370 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AIU88144
LinkDB
All DBs
Position
complement(1907574..1908887)
Genome browser
AA seq
437 aa
AA seq
DB search
MQQPRIGFVSLGCPKNLVDSERILTELRTEGYQVVPRYDDAELVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHQYVPKPTHNP
FTSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLVDA
GVKELLVISQDTSAYGADVKQRTGFWNGQPVKTSMVSLCEQLASLGVWVRLHYVYPYPHV
DDVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPDLTLRSTF
IVGFPGETEEDFQMLLDFLKEAKLDRVGCFKFSPVEGAAANELPDQVPEEVKEERFHRFM
QLQQAISTQRLQDKIGREVLVLIDEIDEEGAIGRSMADAPEIDGAVYLNGETGVKVGDIV
KVRVEHADEYDLWGSRV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccacgtatcggctttgtttccctcggttgcccgaaaaacctcgtcgactcc
gagaggattctgaccgaactgcgtactgaaggttaccaggtcgtcccacgttatgacgac
gctgaactggtgatcgtcaatacctgtggttttattgacagcgccgtgcaagagtcgctg
gaagccatcggcgaagcgctgaatgaaaacggtaaagtcatcgtaacaggctgtctgggt
gccaaagaaaaccaaatacgcgaagtgcatccaaaagttctggaaattaccggcccgcac
agctacgagcaagtgctgtcacacgtccatcaatatgttcccaaaccaacgcacaacccg
tttaccagtctggttcccgagcaaggtgtgaaactcacgccacgccattacgcctatctg
aaaatctcagaaggctgtaaccaccgctgtacgttctgcatcatcccttctatgcgtggt
gatctggatagccgaccaattggttcggtgctggatgaagcgaaacgtctggttgatgcc
ggagtgaaagagctgctggtgatttctcaggacacctcggcatacggtgcggatgtgaaa
cagcgtactgggttctggaacggccaaccggtcaagaccagcatggtcagcctgtgcgag
caactggcatcactgggtgtgtgggtgcgcctgcactatgtctacccttacccacacgta
gacgatgtgatcccattaatggccgaaggcaaaatcctgccttatctggacattccactc
cagcatgccagcccgaagattctcaagctgatgaagcgccccggtgcggtagaaagaacg
ctggaacgcatcaaacgctggcgtgagatctgcccagacttaacgctgcgttctaccttt
attgtcggcttccccggcgaaacggaagaagatttccagatgctgctcgacttcctgaaa
gaagccaaacttgaccgcgtaggctgctttaaattcagtccggtcgaaggcgcagcggca
aatgaattgccagatcaggtgccagaagaggtcaaagaagagcgtttccaccgcttcatg
cagcttcagcaggcgatttccacccagcgtttacaggataaaattggccgtgaagtgctg
gtgctgatcgatgaaatcgacgaagaaggcgcgattggccgcagcatggctgacgcccct
gaaattgatggcgcagtttacctgaacggcgaaaccggcgtgaaagtcggtgacatcgtt
aaggtgagagtagaacacgcagacgagtacgatctgtggggtagccgcgtttaa
DBGET
integrated database retrieval system
