Pseudomonas chlororaphis PCL1606: PCL1606_18410
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Entry
PCL1606_18410 CDS
T03768
Name
(GenBank) FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcz03016
]
PCL1606_18410
Enzymes [BR:
pcz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
PCL1606_18410
Transfer RNA biogenesis [BR:
pcz03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PCL1606_18410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
GIDA
FAD_binding_2
FAD_binding_3
Pyr_redox
Pyr_redox_2
FAD_oxidored
3HCDH_N
HI0933_like
AlaDh_PNT_C
Shikimate_DH
Pyr_redox_3
ApbA
Motif
Other DBs
NCBI-ProteinID:
AKA23296
UniProt:
A0A0D5XW37
LinkDB
All DBs
Position
complement(1898419..1900416)
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AA seq
665 aa
AA seq
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MTAELPPATAPHAQLDWDDQGRPRSRVFDDVYFSSDSGLDETRHVFLEQNRLRERFAALA
PGARFVIGETGFGTGLNFLCAWQLFEQQADASARLHFVSVEKYPLSPADLQRALALWPEL
APLAARLLQAYVAVHQGFQRLALDGGRVTLTLLIGDAREQLPQLDAQVDAWFLDGFAPAK
NPEMWTAELFAELARLAAPGSSISTFTSTGWVRRLLNAAGFKMKRTPGIGRKWEVLRGEF
LGWPEDTPAPAANKPWFARPAQRVQDRHALVIGAGLAGCASAASLAARGWRVSLLERHGH
VAQEASGNPQGVLYLKLSAHGTALSQMILSGFGYTRRLLESLQRGLDWDDCGVLQLAFNA
KEAERQAQLAAAFPADLLHPLDRPRAEAVAGIGLEHGGLFYPEGGWVHPPALCQWQAAHP
RIELLPHHDVLELRRVDGQWQAWDGERLLASAAVVILAGAAEIKRFPASAGLPLKRIRGQ
ITRLPQTARSQSLATVVCAEGYVAPGRLGEHTLGASFDFTSLDLTPTAAEHAGNLALLEE
ISTDLRERLEAEQLQPEALEGRAAFRCTSPDYLPIVGPLADQAAFAETYAVLGRDARQVP
DLPCPWLEGLYVNSGHGSRGLITAPLSGELLAAWLDHEPLPLPRSVAEACHPNRFALRRL
IRGKP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaattaccccctgccaccgcgccccacgcccagctcgactgggatgaccag
ggccgcccgcgttcgcgggtcttcgacgatgtgtatttctccagcgattcgggcctggac
gaaacccgccatgtgtttctcgaacagaatcgcctgcgcgagcggtttgccgcgctggcg
ccgggagctcgcttcgtcatcggcgagaccggtttcggcaccgggctgaactttctctgc
gcctggcagttgttcgagcaacaggccgacgccagcgcgcgcctgcacttcgtcagcgtg
gaaaaatacccgctgagccccgccgacctgcaacgcgccctggccctgtggccggaactg
gcgccactggccgcgcgcctgctacaggcctatgtcgcggtgcatcaggggtttcagcgc
ctggcgctggacggtggccgggtgaccctgaccctgctgatcggcgacgcccgggagcaa
ctgccgcaactcgacgcccaggtcgatgcctggttcctcgacggcttcgccccggcgaaa
aacccggaaatgtggaccgccgagctgttcgccgaactggcgcgcctggccgcgccgggg
tcgagcatcagcaccttcaccagcaccggctgggtccgccgcctgctcaatgccgccggt
ttcaagatgaagcgcacccccggcatcggccgcaaatgggaagtgctgcgcggcgagttc
ctcggctggcccgaagacacgccggcgccggcggcgaacaagccctggttcgcccggccg
gcgcaacgcgtccaggatcgacacgcgctggtgatcggcgccggcctcgccggttgcgcc
agcgcggccagcctggccgcgcggggctggcgggtcagcctgctggagcgtcacgggcac
gtggcgcaagaggcctcgggcaatccgcagggcgtgctgtacctgaaactctcggcccac
ggcaccgccctgtcgcagatgatcctcagcggtttcggctacacccggcgcctgctcgag
tcgttgcagcgaggcctcgactgggacgactgcggcgtgctgcaactggccttcaacgcc
aaggaggccgagcgccaggcgcagttggcggccgctttcccggccgacctgttgcatccg
ctggatcggccccgggccgaggcggtcgccggcatcggcctggaacatggcgggctgttc
tatccggagggtggctgggtgcatccgccggccctgtgccaatggcaagccgcacacccg
cggatcgagctgctgccgcatcacgatgtactggaactgcgccgggtcgacggccagtgg
caggcctgggacggcgagcgattgctggccagcgccgcggtggtgatcctcgccggcgcc
gccgagatcaagcgtttcccggccagcgccgggttgccgctcaagcgtattcgcgggcaa
atcacccgcctgccgcagaccgcccgcagccagagcctggccacggtggtctgcgccgaa
ggttatgtcgcgcccgggcggctgggcgaacacaccctgggcgccagtttcgatttcacc
agcctcgacctgacgccaaccgccgccgagcatgcgggcaacctggcgctgctcgaggag
atctccacggatctgcgcgagcgcctggaagccgagcaattgcaacccgaggccctggaa
ggccgcgcggccttccgctgcaccagcccggactacctgccgatcgtcggcccgctggcg
gaccaggcggccttcgccgagacctacgccgtgctgggcagggatgcgcgccaggttccg
gacctgccctgcccctggctggagggcctgtacgtcaacagcggccatggctcgcgcggg
ctgatcaccgcgccgctgtcgggcgaattgctggctgcctggctggaccacgaaccgctg
cccttgccgcgcagcgtggctgaagcctgtcaccccaatcgctttgccttgcgtcggttg
attcgcggcaagccctga
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