Phoenix dactylifera (date palm): 103701170
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Entry
103701170 CDS
T03274
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103701170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103701170
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103701170
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103701170
FA (Fanconi anemia) pathway
Downstream FA components
103701170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Yippee-Mis18
T2SSE
Motif
Other DBs
NCBI-GeneID:
103701170
NCBI-ProteinID:
XP_038970983
UniProt:
A0A8B8ZHQ5
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All DBs
Position
17:complement(12209660..12222660)
Genome browser
AA seq
1288 aa
AA seq
DB search
MTAAMDSKTPSQNPNSISKPNVYQIGGVPVEFPYRPYGSQLAFMGRVISTLDRARRQGHC
HALIESPTGTGKSLNLLCSSLAWQQQQRSILLATPTQPTPDPLLHGGGFIPEPTPSRNSE
QPPPATSARAQKRLFAPKIFYATRTHSQISQVIREFRKTSYRVPMGILASRKHYCINKNV
CTKSNVDEECKLLLKDPENLGCVEFKNANKLKAHPSLQQGGCHEVHDIEDLVKVGRTVKG
CPYFAAQILAEEGHIVFCPYSYIINPIVRRAMDVDIKGCIVILDEAHNIEDMAREGGSID
AEEEVLFKLQTELGQLCMIDSVAMIYRPLYDMIQGIISWISERKNNLQKREFENYSSHWT
GDKAIRELQQAGITQQCFPILQECATKAIKAATDAEPGKLCLSGISAITLEGLFSSLNYF
FSENGSHALDYQLALQQHVKRDGSNAASGLKCTFSLWCLNPAIVFREIANLSLSVILTSG
TLSPMGSFASELGVQFEVSMEVPHVIDVDSQLWAAVIPSGPANCQLNASYKTADGYPFQD
ALGASLEEICKIVPSGALVFFPSYKLLEKLRDRWCQTGQWARLNAQKPIFVEPRGTMDEF
EPVLRGYYDAIHRNNKTSHGKTRYGLKRVSKHLPTKEFLQNSIRGGAALLAVCRGKVSEG
IDFSDENARVVVIVGIPFPNINDIQVVMKKKYNDAYKSSKNLLSGNEWYCHQAFRALNQA
AGRCIRHRFDYGAIILLDERYKEERNLTHISRWIRNSIKQYSSFDESLKGLQDFFQNVER
RIGPKSKEATGENAMQTDSLVPETNSEISPSSKQSISDQGFPLKKNQKEKKLKHQNRRKM
VPENTVATAESSQLAKDSSPTIVEDAPVSLLKARSSRKPKAAGETNKELANSSTSCTDFE
NITPASSKYSDTLSVESSENILPQSLAIENTVIEDQIASPRDPSDDKSSYSTAANTCNQS
LDGPSFSLSTTITSVADTPEKLLYADACNSEKDSSLNMSVNSHSQKRRRIMYSPLSSCTQ
TGRLSCPDAECSCQVNQVSSRNISRDALQRSESPLAYNCPGSRHKKPIQGLFAEDSCDVS
AVSTDDPSMEKKLRICCSVCRSPLGIHENNFLVPCSLTSSSKAYLANVLQPRPPSARLTK
SLPQSPQTHLPVLISDIASVDQRIFDRCTKDGAPQHDVWSEEDGCVFRTLTCPFCNVPKT
LGVQVMATDASNVHLLNKVFFNADHVDMTYEQTSKQEGTPPVCASVPNFGPTVIQIEKYV
YNPQLKNATKSKLRLPKRDHISSDQDGD
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagcgatggattccaaaacgccctcccaaaaccctaactctatctctaaaccc
aatgtctaccagatcgggggcgtccccgtggagttcccctacaggccctatggatcccag
ctcgcgttcatggggcgcgtcatctccaccctcgaccgcgcccgtcggcagggccactgc
cacgctctcatcgagtcccccaccggcaccggcaagtctctcaacctcctctgctcctct
ctcgcctggcagcagcaacagcgcagcatcctcctcgccacccccacccagcccaccccc
gatccactcctccatggcggcggcttcatccccgaacccacgccgtcaagaaactcggag
cagccgcctccagctacgagcgctagggctcagaagagactgttcgcacctaaaattttc
tatgccacgaggacgcattctcagataagtcaagtcattcgtgagtttaggaagacgtca
taccgagtgccaatgggaattctggcatcacggaagcactattgcattaataaaaatgta
tgcacaaagtccaatgtcgatgaagagtgcaagttgctactgaaggacccagaaaatcta
ggctgcgttgagttcaaaaatgcaaataagctcaaggctcatccttcccttcagcaaggt
ggttgtcatgaagttcatgatattgaagatcttgtgaaagttggccggaccgtgaaaggt
tgtccatattttgctgcacaaattttggcggaggaaggacacatagttttctgtccttac
agctacatcataaatccaattgttcggagagcaatggatgttgatattaaaggatgcatt
gtaattcttgatgaggcccacaacatagaggacatggcacgggagggtggtagtatagat
gctgaagaagaagttctttttaagctgcaaacagagctagggcaactatgcatgattgac
agcgttgcaatgatataccgacccttatatgacatgatccagggaattataagttggata
agtgagaggaaaaacaacttgcaaaagcgtgaatttgagaattactcttcgcattggact
ggggataaagctatcagagagcttcagcaagctggaattactcagcagtgcttcccaatc
ttacaagaatgtgccacaaaggcaattaaagctgctacagatgcagagccaggaaaactt
tgtttaagtggcatctcagctattacactggagggattgttctcctcgcttaattatttt
ttctctgaaaatggctctcatgcacttgattatcaacttgcgctgcagcaacatgttaaa
agagatggtagtaatgctgcgagtggcttgaaatgcacgttcagcttatggtgccttaat
cctgctattgttttccgagagatagcaaacctttctctttcagtaattcttacatctgga
acactctctcctatgggttcatttgcatctgaacttggagtacagtttgaagtttccatg
gaagtaccacatgtaattgatgtggattcacagctttgggctgcagtaattccctctggc
cctgcaaattgtcagttaaatgccagctataaaacagcggatggatatcctttccaggat
gcacttggagcttcactggaggaaatatgtaagattgtaccaagtggtgcccttgttttc
tttcctagctataagctgctggaaaaactacgtgatcgctggtgtcagactggtcaatgg
gctcggttgaatgcccaaaagcccatctttgttgaaccaagaggaactatggatgaattt
gaacctgttctgagaggatactatgatgcaattcacagaaacaataaaacttctcatggg
aaaacaagatatggtctaaagcgagtctcgaagcatcttcccaccaaggaatttctgcaa
aattctatacggggaggagctgctcttcttgcagtttgtcggggaaaggtatcagaaggg
attgatttctctgatgaaaatgctagagtagttgtgatcgtcggtattccatttccaaac
ataaatgatattcaggtggtgatgaagaagaaatataatgatgcatataaatcatcaaaa
aatctcttaagtgggaatgaatggtactgccaccaagcatttcgtgctctgaatcaagct
gcaggccgttgcattcgccacaggtttgattatggagccataatattattagatgagcgg
tataaggaagagcggaatcttacacacatttcaaggtggataaggaattcaatcaagcaa
tacagcagctttgatgaatcactaaagggattacaagacttttttcaaaatgttgagaga
cggattggcccaaaaagcaaggaagcaactggtgagaatgcaatgcagacagactcgctc
gttcctgaaactaacagcgaaatttcaccctcatcaaagcaaagcatctctgaccagggg
ttcccactgaagaaaaatcagaaagagaagaagctcaaacatcagaacagaaggaagatg
gttcctgaaaatacagtagccacagcagagtccagccaattggccaaggattcaagtcct
acaatagtggaagacgcccctgtctcccttctaaaagctcgatccagtagaaaacccaaa
gcagctggtgagacgaataaggaactagcgaacagctccacatcttgtaccgactttgaa
aacatcactccggcgtcctccaaatattcagacacactttctgtagaatcatcagaaaac
attctgcctcagtccctggctattgaaaacactgtgatagaagatcaaattgccagtccc
agagacccatcggatgataaaagctcatactcaacagcagctaatacctgcaaccaatca
ctagatggaccatctttttcactctcgactacaattacaagcgtagcagatactcctgaa
aagctactatatgcggacgcctgcaattctgaaaaggattcatctttgaatatgagcgta
aattcccacagccagaaaaggaggaggataatgtattcaccattgagtagctgtacacaa
acaggccgcttaagctgtcctgatgcagaatgctcgtgtcaggttaaccaggtcagcagc
aggaatatatccagagacgcccttcaaagatctgaatcacctttagcatacaattgtcca
ggatccaggcataagaaaccaattcaaggactgttcgccgaagatagttgtgatgtatca
gctgtctcgactgatgatccgtccatggaaaagaagctgcgcatctgttgttcagtttgc
aggagcccattagggatccatgagaacaattttcttgttccttgttcgttgacttcatca
tcaaaagcctatttggcaaacgttctgcaacccagacctccgagtgcccgtttgacaaag
agtctcccccagagcccacagacacatttgcctgttctaatctctgatattgcttctgtt
gaccagcgtatctttgacaggtgcaccaaggacggtgctccacaacatgatgtttggtct
gaagaagatggttgtgtattcaggactcttacttgccccttctgcaatgttcccaagacc
cttggggtacaggtcatggcaactgatgcatccaacgttcatctacttaacaaggttttc
tttaatgctgaccatgtggatatgacatatgagcaaacatcaaagcaagagggtacgcct
cctgtttgtgctagtgttcctaactttggccccactgtgatccagatcgagaaatatgtg
tataatcctcagcttaagaatgcaacaaaatcaaagctcaggctacctaaaagggatcac
atctcatcagatcaagatggagactaa
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