Phoenix dactylifera (date palm): 103706601
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Entry
103706601 CDS
T03274
Name
(RefSeq) protein PHYLLO, chloroplastic isoform X1
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda00130
Ubiquinone and other terpenoid-quinone biosynthesis
pda01100
Metabolic pathways
pda01110
Biosynthesis of secondary metabolites
pda01240
Biosynthesis of cofactors
Module
pda_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
103706601
Enzymes [BR:
pda01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
103706601
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
103706601
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
103706601
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
103706601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Abhydrolase_1
MR_MLE_C
TPP_enzyme_M_2
TPP_enzyme_N
Abhydrolase_6
Hydrolase_4
Abhydrolase_2
TPP_enzyme_C
Thioesterase
Ndr
Abhydrolase_3
BAAT_C
MenC_N
Mbeg1-like
Abhydrolase_11
Abhydro_lipase
DLH
Lipase
DUF900
DUF726
DUF676
TPP_enzyme_M
CLP_protease
Motif
Other DBs
NCBI-GeneID:
103706601
NCBI-ProteinID:
XP_026660281
UniProt:
A0A8B8J4E5
LinkDB
All DBs
Position
1:32033753..32148432
Genome browser
AA seq
1754 aa
AA seq
DB search
MMRADHLRLSKPSPLSLSIPHLRSLSRSIRLKIRSKASFPSRRSSLGNLNLRRSNLLPFQ
SKPNFQINAEDGCYGGLEIAADEFLELGDMDLPVELSVTRALPPALTLREGFDKIKEAIE
KLKANPPCLRSGVLRIQVAVPPSTKALNWLCCQCKELSVFPQFYFLARQTREQSLELASL
NGMVEVSGIGTAIYVHGSSHTRKGCNLIARYLSVDSPLIRAYGFIGIHYNKESFMMEDGA
GSFFFFIPQIELNEFEGFSLLASTLIWDDFVSYTFERAVHTFELYFHQIIQYIHPIGTYV
KDMWMNYFYGLSNLMEHKHVQMVFLNAEILVRIDAGANNLLQAAVLMFCKYCFESLLFLQ
EDSPSCCRYYFRHSSTASFGSNMLMDSRGTNCLIKECANINYLWASLIIEECVRLGLTYF
CIAPGSRSSPLAISACGHSLTTCISCFDERSLAFHAVGYARGSLKPAVVITSSGTAVSNL
LPAVVEASHDCVPLMLLTADRPPELQDVGANQAIDQVNHFGKFVRFFFSFPPPTDQIPAR
MVLTTVDSAAYSATQAPYGPVHINCPLREPLEDCPKEWSINCLRGLDLWLSNAGPYTRYI
KMQHCCSCNGYSGQVAEVLEVIQRAKQGLLLIGAIHTEDEIWAALLLAKHLFWPVVTDIL
SGLRLRRLFTSFTEIEDRFYFIDHLDNALLSNAVKGWAQPDVILQIGSRITSKRIVQLLE
FCSPSAYILVDKHPYRHDPSHIVTHRIQSTISEFADIILKIYIMRKPRKWSSFLKTLDMV
VAWEIAFQIHSECSLTEPHVAHIIGEVLQDDVVLFVGNSMVIRDVDMYGRGWVKSVMKNT
HLMSDCDLQFHGIQVAGNRGASGIDGLLSTAIGFAVGCNKRVICVIGDISFLHDTNGLAI
LNQRARRKPMTILVINNHGGAIFSLLPIADRALPNVLNQYFYTAHDVSISKLCAAHSVKH
LLARTKMELHNALWRSQNEQTDCVIEVESNIADNAKFHSMISQSAYQAANQVLDFLIRFP
NSESVKNGLFVSKIHKMEFSLYRIQLCAPLASSQLRNDRNKLYHEGFILNITLDDSSSGF
GEVAPIEIHEEDLLDVEEQLRFLVHKLEGSEISYFLPLLRGSFSHWIWRSLGVPPSSIFP
SVRNGMEMAILNALAARAGSSLLELVTGCRSSLQDSQSLKDIMKGSARIEISALVDCNGT
PKQVAHVVSRLVDEGFTTIKLKVARRENLIEDVAVIQEIREMVGYKINIRVDANRKWTYE
EAVEFGSGVKYFDIQYIEEPVCLEDDIIKFCQESCLPVALDETIDNLKGDFLNKLQNFVY
PGIVAIVIKPSVVGGFENAALIAKWAQLHDKMAVVSASFESSLSLSAYIQFAYFLEQQNI
TICRLRKRKLSAAIAHGLGTYQWLKEDVSTNHLEFHVAPNGDKMEASVKNADTFLRYFQI
KDKTVQRIYTGEQLKSYRIEVNGDNFSCSFKLQEAGVDTKKQVVIYLHGFLGASQDWVPI
MKAISPAARCISIDLPGHGESQVQWHMDKSSKQKLNISVESVADIIMKLICDITSGGVIL
IGYSMGARIALYMTLKYNEKINGAVIISGSPGLRDEAARRIRSAQDEARAHFLLAHGLQD
FLHIWYAGSLWKSLRDHPHFNEIVRNRAKHSDIQALAKVLSDLSIGKQMSLWEDLKHCQK
PLLFIAGDKDIKFRDISKQMCSEIRTCSEGKDHIPREQLSKVVIVPDCGHAVHLENPLPV
INAVRKFITNFDKL
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgagccgatcacctccggctctctaaaccctcccctctttccctctctattccc
catctccgctccctctcgcgatccatccgcctcaagatacgctccaaagcttcgtttcct
tcgcggcggtcatctctcggaaatctcaatctgcgccgctctaatcttctcccttttcag
tcgaaaccaaatttccagattaatgcggaggatggttgttatggtggattggagattgct
gctgatgagttcttggaactgggggatatggatttgccggtggagctctctgtgactcga
gctcttccgcccgctctcacactcagagagggttttgataagattaaagaggcgatcgag
aagctcaaggcgaatccaccatgtttgaggagcggtgttttgaggattcaggttgcggta
cctcctagtacaaaagctttaaattggctgtgttgtcaatgcaaggaattgtcagtgttt
cctcagttttattttttagcaagacaaactcgtgagcaatctcttgaattggcttcatta
aatggcatggttgaagtttctggtattgggacagcaatttatgttcatggctcttcacat
acccgaaaaggatgtaatttgatagcaagatacctttcagttgattcgcccctgataaga
gcttatgggttcataggtatccattataacaaggaatcattcatgatggaggatggggct
ggttcatttttcttctttattccacagatagagctgaatgaatttgagggcttctcttta
ttagcatctactctgatctgggatgattttgtatcatatacttttgagagagcggttcac
acctttgaattatatttccaccagatcatccaatatattcatccaattggcacatatgtc
aaagacatgtggatgaattacttttatgggctgtcaaatttgatggagcacaaacatgtt
caaatggtattcctgaatgctgaaattcttgttagaattgatgctggagccaataatttg
cttcaggctgcagttctcatgttctgcaaatattgctttgaatcattattatttttgcag
gaagactctccaagttgttgccgttattattttagacattcatcaacagcttcttttgga
agtaacatgcttatggattctcgtggaactaattgcttgataaaagagtgtgccaacatc
aattatctatgggcatcacttataattgaagaatgtgttcgacttggtttgacgtacttc
tgtatagctccaggatcacgatcatctccacttgcaatttctgcatgcggtcattccttg
acaacttgcatatcatgttttgatgagcgctcccttgcatttcatgctgttggctatgca
agaggatctcttaaaccggcagtggtcataacatcatcaggaactgctgtgtcaaatctt
cttcctgcggttgtggaggctagtcatgattgtgtacctcttatgttactcacagctgat
cgccctccagagctgcaggatgtaggagcaaaccaagcaattgatcaggtcaaccatttt
ggcaaatttgtgaggtttttcttcagttttcctccgcccactgatcaaatacctgctagg
atggtcctaacaactgttgattcagctgcatacagtgcaacacaagcaccatatggccct
gtgcatattaattgtcccctcagagagccattggaagactgcccaaaagaatggagtata
aactgtttaagaggattagatttgtggttgtcaaatgctggaccttatactagatacatc
aaaatgcaacattgctgctcatgcaatggttatagtgggcaagttgctgaggttctggaa
gtaatacagagagcaaaacagggtctcttattaattggtgccatccacactgaagatgaa
atatgggcagctcttcttttagctaaacatcttttctggccagttgttactgatattttg
tcaggactacggttgcgcagattatttacttcatttacagagattgaagacaggttttat
tttattgatcatttggataacgctctactctcgaatgctgtcaagggctgggcacaacca
gatgtgatccttcagattggtagcaggattacaagcaaacgtattgtccagttgttggag
ttctgttctccttctgcatatatcttggttgacaagcatccataccgtcatgatccttct
catattgttactcacagaatccagagtaccatatctgagtttgctgatattatacttaaa
atttatatcatgaggaagcccagaaaatggagcagtttcctgaaaacactggatatggtg
gttgcatgggaaatagcatttcaaattcattctgaatgctcgctaaccgaaccacatgtt
gcgcatataattggagaagtacttcaagatgatgttgtcttatttgttgggaacagcatg
gtcattagagatgtcgacatgtacggaaggggctgggtgaaatctgtcatgaaaaatact
cacctgatgtcagattgcgatctacaattccatggtatacaagtggctgggaacaggggt
gctagtggtattgatggtttgcttagcacagccattggttttgctgtaggatgcaacaaa
cgagttatttgtgtgattggtgatatatctttccttcatgatacaaatggattggcaatt
cttaatcaaagggcacggaggaaacctatgactattcttgtaataaataaccatggtggt
gcaattttcagtcttctaccaattgcagatagggcactacccaatgtgttaaatcagtac
ttctacacagcccacgatgtctcaattagtaaactttgtgctgcacacagtgtgaaacat
ttactagcacggacaaaaatggaactgcataatgctctatggagatctcaaaatgagcag
accgactgtgtaatagaagttgaaagcaatattgcagataatgccaagtttcacagcatg
ataagtcagtctgcttatcaagctgcaaaccaagtgctggatttcctaataaggtttcca
aattctgagtctgtaaagaatggcttgtttgttagcaagatccataaaatggagttctca
ttatatagaatccaactttgtgctccgcttgcttcaagtcaacttagaaacgataggaac
aagttatatcatgaaggttttatcctaaatattactttggatgatagtagttcgggattt
ggagaggttgccccaatcgaaattcacgaggaggatctgttagatgttgaagagcagctg
agatttttggttcataaactagaaggttctgagataagttattttcttccattgctcagg
ggctccttctctcactggatatggagaagcttaggagttccaccatcttctatatttcca
agtgttaggaatggcatggagatggctatactaaatgcactagcagcaagagcaggatcc
agtttattggaattagttactggatgtagaagttccttacaagattctcagtcattgaaa
gatattatgaaggggtcagcaaggatagagattagtgcccttgtagattgtaatggtact
cctaagcaggtagctcatgtggtgtctcggttagttgatgaaggtttcactacaataaaa
ctaaaggttgcacgtcgagaaaatcttattgaagatgtggcagtcatccaagaaattaga
gaaatggttggatataagatcaacatccgtgttgatgcaaatcggaagtggacatatgaa
gaggcagttgaatttggatctggtgtgaaatattttgacatacaatacattgaggaacct
gtatgtcttgaagatgatattataaagttttgtcaagaaagttgtttacctgtagcttta
gatgagactattgacaatcttaaaggagatttcctcaataaactccaaaactttgtatat
cctggaatagtagctattgtaattaaaccaagtgtagttggtggatttgaaaatgcagca
cttattgcaaaatgggctcagcttcatgacaagatggctgttgtcagtgcttcctttgag
agtagtcttagtttgtcagcatacatacaatttgcatacttccttgagcagcagaatata
acaatatgcagattgagaaagagaaagttgagtgcagccatagcccatggccttggaaca
tatcaatggcttaaggaagatgtatccactaaccatctagagtttcatgtagccccaaat
ggtgacaaaatggaagcctctgtgaaaaatgcagatactttccttcgttattttcagatc
aaagataagacagttcagaggatctacactggtgaacaacttaaatcctacagaatagaa
gttaatggtgataacttttcctgttcattcaaattgcaagaggctggtgtcgacacaaag
aagcaagtagttatctatcttcatggctttctgggtgcaagtcaggactgggttccgata
atgaaggctatatcacctgctgcacgatgcatttctattgatcttcctggccacggggaa
tctcaggtgcaatggcatatggataagagctcaaagcaaaagctgaacatctcagttgaa
tcagttgcagatataataatgaagttaatctgtgatattacctctggaggtgtcattctt
atcggatattcaatgggtgctaggattgcactgtatatgacattgaaatacaatgaaaag
atcaatggagctgttataatatcaggaagtccaggattaagggatgaggcagctagaaga
attcgtagtgcacaagatgaagcaagagctcacttcctattagcacatggtctgcaagat
tttctgcatatatggtatgcaggcagtctatggaaaagcttgagagatcatccacatttc
aacgaaatagtcagaaatcgtgcaaagcatagtgacatccaggctcttgcgaaagttctc
tctgacttgagcattggaaagcaaatgtctttgtgggaagacttgaagcactgccagaag
cctcttctcttcattgccggagacaaggatataaagttcagagacatttctaagcaaatg
tgcagtgaaatcaggacatgctccgaaggtaaagatcacattccaagagaacagttatcc
aaagtggttatagttccagactgtggccatgctgttcatttggagaaccctctcccagtg
atcaatgctgtcaggaagttcataacaaactttgacaaactatag
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