KEGG T05773: 113667562

Pocillopora damicornis (lace coral): 113667562

Entry

113667562         CDS       T05773

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like

K03011

DNA-directed RNA polymerase II subunit RPB3

Organism

pdam Pocillopora damicornis (lace coral)

Pathway

pdam03020

RNA polymerase

pdam03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:pdam00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113667562
  09124 Replication and repair
   03420 Nucleotide excision repair
    113667562
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdam03021]
    113667562
   03400 DNA repair and recombination proteins [BR:pdam03400]
    113667562
Transcription machinery [BR:pdam03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     113667562
DNA repair and recombination proteins [BR:pdam03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113667562

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_L

Other DBs

NCBI-GeneID:

113667562

NCBI-ProteinID:

XP_027039207

LinkDB

Position

Unknown

AA seq 274 aa
MPYANQPSVKILELTEENVKFVIENTDLSMANGLRRIFIAETPTIAIDWVQIDNNTSVLH
DEFIAHRLGLIPLTSDESVDRLCYSRDCTCEEFCPDCSVELKLEVKCTDDQTRHVTTRDL
ASSDPKVIPVTSRHHEDENSDYGEQDDILIVKLRKGQELKLRAFAKKGFAKEHAKWNPTA
GVAFEYDPDNALRHTTYPRPEEWPKSEYTELDEDSHQAPFDPNAKADRFYINVESCGSLR
PETIVLSGLSVLKKKLSDLQTQHSHEVAADVLTI

NT seq 825 nt +upstreamnt +downstreamnt
atgccttacgcaaaccaacccagtgtaaaaattctggagcttacagaagaaaacgtgaag
tttgtgatcgaaaatacagacttaagcatggctaatggcctacgaaggatatttattgct
gaaactccaactatagccatagactgggtacaaattgacaacaacacttccgtattacac
gatgagtttattgcccacagattaggtcttattccattgaccagtgatgaaagtgtggat
agattgtgctactccagagattgcacatgtgaggagttctgtccagattgttctgttgaa
ctgaaactagaagtaaaatgcacagatgatcaaacacgacatgtgacaaccagagacctt
gcatcttcagatccaaaagttattccagtcacatcacggcaccatgaagatgaaaacagt
gactatggtgaacaggatgacattttgattgttaagctacgtaaaggacaggagctcaag
ttgcgagcttttgccaaaaagggatttgcaaaggaacatgccaaatggaaccccacagca
ggtgtggcatttgagtatgaccctgacaatgccctaagacatacaacgtatccaagaccg
gaggaatggccaaagagtgaatacacagaactggatgaagatagccatcaagcaccattt
gatccaaatgctaaagcagacagattttatataaatgttgagtcctgtggttcattaaga
cctgagactatcgtgttgagtgggctgtctgtgctcaagaaaaagctgagtgatctccag
actcaacacagccatgaagtagctgctgatgtcttaaccatataa

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