Pocillopora damicornis (lace coral): 113675892
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Entry
113675892 CDS
T05773
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113675892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdam03021
]
113675892
Enzymes [BR:
pdam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113675892
Transcription machinery [BR:
pdam03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
113675892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
113675892
NCBI-ProteinID:
XP_027048299
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MAAVQDQNSALPDLKNLTSCNFGKLSQQQNKILQDLVSPHIRSFNFMLEEGLSLAVQAIH
PQEFLLADGQRATIYFTDASIGVPTVSENNLHASQMKLFPSECRERGVTYKAKLQVTLQW
KINNQLQGSVSKVIASIPMMVKSNHCSLAKLSPQELVQKHEEAEEAGGYFIVNGIEKIIR
MLILPRRNFPVAVQRPSWKTRGTMYTEYGIQMRSVRKDQTAMNMILHYLSDGSIVIAISY
EKELFYVPLVFILKALVKITDQQIYRHLVAGEEENSFLKDCVATMLRSAQLQGATTQQAV
LKFIGERFRVKMRLPDWYSDEAVAQFVLQNCVCVHLNADVDKFNLMIFMARKLYAFALEK
CATESADNPMMQEVLLGGHLYLMTLKEKLEVWLYSVRANIEKDMTKKQSYCLNTASLLQA
MSRSTNISHQMEYLLATGNLVSRSGLGLMQTTGFSVVADRLNFYRFLSHFRCVHRGTFFS
QMRTTSVRKLLPEAWGFLCPVHTPDGAPCGLLNHLSASCQVVNDVLQTSHLLRLLCSLGM
SLIDAPAPADVKSCYVVILDGRVIGRVDMDLAPSLANRLRMLKVLGLEEIPQMLEICLVP
ITKVASQYPGLYIFSTPARMMRPVFNLAANKVEMIGTFEQVYMDIAVVKEEAYEAKTTHL
ELKPASMLSAVASLTPFSDHNQSPRNMYQCQMGKQTMGTPAQALKYRSDNKLYRIQTPQS
PLVRPVAHDELSVDNYALGTNAVVAVISYTGYDMEDAMILNKSSYERGFAHGSVIKCEII
DLKKVPGNEFQVSSVRFGCLPDDERVQGILDSDGLPPIGAKLETGDPYYCFIDDNIGQAV
IQKYNSLESAIVEDVKVLGNDEGTGLLQKASIKLRIQRNPIIGDKFSSRHGQKGICSQKW
PVENMPFTESGMTPDIIFNPHGFPSRMTIGMMIESMAGKSASLDGLAYDATPFTFSEDNP
AITYFGSLLKKSGYNYYGTERMYSGVDGREFEADIFFGVVYYQRLRHMVADKYQVRTTGP
IDILTHQPIQGRKRQGGIRFGEMERDALLAHGASYLLQDRLMNCSDRTVGHVCTKCGSIL
SPLLEKPADELAAAAAHRKRKWICKVCESSEHIQLLAFPYVFRYLVAELAGMNIKTCLQV
KKVGT
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcaagaccaaaacagcgctcttccagacttgaagaatttaacctcttgc
aacttcggtaaattgtcacaacaacaaaacaagatactacaagatcttgtcagcccgcac
ataaggtcgttcaacttcatgctggaagaagggctttctcttgcagtccaggccatacat
ccacaagaattcttgcttgcagatggacagagagccacgatatacttcactgatgcttca
attggagtccctacagtgtcagaaaacaacttacatgcttcacagatgaagttgttccct
tctgagtgtagagaacgtggggttacatacaaagcaaaactccaggttactctgcaatgg
aaaattaacaaccagctgcaaggaagtgtttcaaaggtcattgctagtataccaatgatg
gtcaagtctaaccactgctccctagcaaagctttcacctcaggaactggttcagaaacac
gaggaggcagaggaagctggaggttatttcatagtcaatggaattgaaaaaattataaga
atgctcatccttcctagaagaaactttccagtagctgttcaaagaccatcatggaagaca
aggggcaccatgtacacagaatatggcattcagatgagatcagtcaggaaggaccaaaca
gctatgaatatgattctccactatctttctgatggaagtattgtgatagctatttcctat
gagaaagaattgttttatgttccactggttttcattctcaaagccttagttaaaataaca
gatcaacaaatctaccgtcatctggtggcaggagaagaagagaacagcttccttaaagac
tgtgtagccacaatgctcagatctgcccaattacagggagctaccactcaacaggctgtg
ctcaaatttattggtgaaagattcagagtcaagatgaggttaccagactggtactctgat
gaagctgtagctcaatttgttctccaaaactgtgtttgtgttcacctgaatgcagatgta
gataagtttaatttaatgattttcatggcaaggaagctgtatgcatttgctctagaaaag
tgtgcaacagaaagtgcagataatccaatgatgcaagaagtacttcttggtggacatttg
tatcttatgaccttaaaggaaaagctggaggtctggctgtatagtgtgcgggccaatatt
gaaaaggatatgacaaagaaacaaagttattgtttaaatacagctagtttactacaggca
atgtcacgtagcaccaacatctcacaccaaatggaatatctccttgctactggtaatcta
gtgtcaagatcaggccttggtcttatgcagaccacaggattttccgtggtggctgaccga
ctcaatttctacaggtttctgtcccacttccggtgtgttcacagaggaacttttttttct
cagatgagaacaacatctgtgaggaagttattaccagaagcttgggggtttctatgccca
gtacacactcctgatggggcaccatgtggtcttttgaaccatttgtcggcatcatgtcag
gttgtgaatgatgtgctacagacttcccaccttctcaggctgttatgttcattaggcatg
agtctgattgatgcccctgcacctgctgatgtgaagtcttgttatgtggttatcttagat
ggcagagtgattggtagagttgatatggaccttgcaccatcacttgccaacagactgcgc
atgttaaaagtacttggactagaggagattcctcagatgctggagatatgtcttgtgccc
attacaaaagtagcaagccaatacccaggcttgtatattttctccaccccagctcgaatg
atgaggcctgtatttaacctggctgcaaacaaagtggaaatgattggaacttttgagcag
gtatatatggatattgcagttgttaaagaagaagcgtatgaggcgaaaaccacacatctc
gaactgaaaccagccagtatgttaagtgctgttgcaagtttaacgccattttcagatcac
aaccaaagtccccgtaacatgtaccaatgtcagatggggaagcaaacaatgggaacacca
gcacaagcattgaaatatcgcagtgataacaaactatatagaatacagactccacagagt
cctttggtacgaccagttgctcatgatgagttatctgttgacaactatgccctaggaaca
aatgctgtggtagctgttatctcctacacgggttatgacatggaggatgccatgatactc
aataaatcatcttatgaacgtggatttgcccatggctctgttatcaaatgcgagatcatc
gatcttaagaaagttccaggaaatgagttccaagtttcaagtgtcagatttggctgcctt
cctgatgatgaacgagttcaaggaatcctcgacagtgatggtcttccaccaattggagca
aagctggagacaggagacccatattattgtttcattgacgacaacattggacaagcagtc
atccagaaatacaacagcttagaaagcgcgattgttgaagatgtaaaagttcttggaaat
gatgaagggacaggtttgctccaaaaagcttcaattaaattgagaatacagagaaatcca
atcattggagacaagttctcaagtcgtcatggacagaaagggatttgtagccaaaagtgg
cctgttgagaacatgcctttcacagagtctggaatgacgccagatattatattcaatcct
cacggcttcccttcacgtatgacaattggtatgatgattgagagtatggcgggaaaatca
gccagcctcgatggattggcctacgatgctacaccattcactttctcagaagataatccc
gccatcacatacttcggaagtcttttaaaaaaatctggttacaattactatggtacggag
cggatgtacagtggcgtcgatggtagagaatttgaagcagatatcttttttggagttgtt
tactatcagcgtctcaggcacatggtagctgacaagtatcaggtccggacaacaggtcct
attgacatactcacgcaccagcctattcagggtcgcaaaagacagggaggtattcggttt
ggagaaatggaaagagacgcattgcttgcacacggtgcttcctatctattacaagatcgc
ctcatgaactgctcagacaggacagtgggtcatgtatgtacaaaatgtggtagcatactc
tctcctctcctggaaaaacccgcggatgagctggcagctgcggctgcgcacaggaagagg
aaatggatttgtaaagtttgtgagagcagcgagcatattcagttgttagcctttccttat
gtcttccgatatcttgttgctgagttagcgggaatgaacatcaagacgtgtttacaagta
aagaaagttggaacgtaa
DBGET
integrated database retrieval system
