Pocillopora damicornis (lace coral): 113678567
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Entry
113678567 CDS
T05773
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdam04040
]
113678567
Ion channels [BR:
pdam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113678567
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
113678567
NCBI-ProteinID:
XP_027051263
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MDGSSLNLIDDLDHINLGEYEATDFGMRVLDSKSNSSVAHFGRASVSAGIKRSISNAVER
NKNTSSMDIFEACREGDVASLNFLLENNATDVDKLSDCGLAPLHYAARNNHGEVIQLLID
HGADPNVTATTENKSLSPLHFASWYDTDEAVNTLIDNKSNVECSAVFGQKPLHFAVTRAS
LELVKTLLTKGKANPNSYDNQHFTALHLAAQRGRLDIIKMLLTYGANLRGQNDEGDTAVH
IAAREGRDEALKHLLQRASLDGISCKDLLNSENCESKSCLHLAVDGGHVKAAIVCIEYGA
DPHPVAKRNLPLHVASSTGNLPMVKFLLSQDSIHVDEEDCEGMTPILRASLSGHVEIIEH
LINKGAAICPLPDSTAPSPLMCAVKRGHHKAAVFLIKRGSPIDLRDAHQRTCLHVAAYSA
NVETVDIILENGGMCLIDSLDRDNRTPLHYAAAKGSLEILQKLLSAGAKIDIKDDEEKIP
LHMATESGSLACVKVLLQADPKTLSSTEYRLRAPLHYAAYEGHFELAKFLLDKGANPDQR
DENHLTPLLIATRLNHYNIVVLLLDYGAKLSAHSKNRTTPIDLAAYFGNARIVRLLLNRG
ADVKNKSSFGKGCLDSAIKGNRPETCMEIVKHKRWKECLEVKDDEGFCMMKHLIEKFPEV
AKLVMDKCIETSDHMKTDVEYSKSFNFVFLDPIPGEQTNTEGERYFGPKLMLKHGHRDLI
LHPLTRELMKAKRLSWRLKYFYLAAFIYTSFTLILTFLLLCLNSQSIDRQHNSTSEFSRE
FCPSYGFPVSRMVTSVISGVSLLSHIYRIYVEKWSYWMDISNILELLSFSAAIITVGSRK
IWHNERFEFSFGILAVLLAYITMMSYLQSSFKAGIYVTMMFEVLRTLLMVCAVFSILLFG
FALVFHVLLSKEANASRNGINLSSNGEDPFGRLDLAMLKVLDMMVGELEYSNFFVDNTLY
LPDLTRFIFAAFCCLVPIVFMNLLIGLAVGDIESIQKNAELKLLAIQIEDVFTFERRLPK
CLLRRFHKSSITKYPNKKRHFWSTSLMVNY
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggacgggagttctttgaatttaatagacgatttagatcatattaacctcggggaatac
gaggcaacggattttggtatgagagttttggattcaaagagtaacagcagtgtagcacat
tttggaagagcctcggtatccgctggaataaaacgaagtatttctaacgctgtggaaaga
aataagaacacatcttccatggacatatttgaggcctgtcgtgagggagatgtcgctagt
ctgaactttttattagagaacaacgcgacagatgtggacaaactgagcgattgcgggctg
gcaccacttcattacgctgcacgtaacaatcacggagaagttatacagctgcttatcgac
catggtgcagaccctaatgtgacagccaccactgaaaacaaatcgctctcaccattgcac
tttgcgagctggtatgacacagatgaagcagtaaatactctcattgataacaaatccaat
gtggagtgcagcgctgtatttggacaaaagcctcttcactttgctgtcacacgtgctagt
ctagaacttgttaagacattgttaaccaaaggaaaagcaaatccaaactcatatgataac
caacattttacagcactgcatctggctgcgcaaagaggacgactggacatcatcaaaatg
ctcctaacatacggagctaatcttcgaggccagaatgacgaaggtgatacggcggtacac
attgcagcgagagagggacgagatgaggccttgaagcatcttctacaaagagcgtcattg
gacggtatatcgtgcaaggatctcttaaacagtgagaattgtgagtcaaagagctgttta
catttagcagtggatggtggacatgtgaaggcagccatcgtttgcatcgaatatggcgca
gatccccatcctgtggctaaaagaaaccttccactccatgtggcgagctctactggtaat
ttacctatggtaaaatttttactatcgcaagattcaattcacgttgacgaggaggactgt
gaaggaatgacaccaatactcagggcctctttgtccggccacgtagaaataattgaacat
ctcatcaataagggagcagccatctgcccgttaccagactccacggcaccatcgccgttg
atgtgtgccgtcaaaagaggacatcacaaagccgccgtgttcctgatcaaacgcggctcg
ccgatagatctgagagacgcccaccaaagaacctgccttcatgtcgctgcttacagtgcc
aatgtagaaactgttgacatcatccttgagaacggcggtatgtgtttgatagacagcttg
gacagagacaataggacaccattacactacgctgctgctaaaggaagccttgagattctt
cagaagttacttagtgcaggggcaaagatagatataaaagatgacgaagaaaagattcca
ttacacatggctaccgagagcggcagcctggcttgcgtgaaagtgttattacaagccgat
ccaaagactcttagtagcacggaataccgcctcagagctccattacattatgcagcgtac
gagggtcactttgaactggcaaagttcttgctcgataagggagctaacccggatcagagg
gacgaaaatcatctgactccgctcttgatagcgacaagattaaatcattacaatatagta
gttctcctcttggattacggcgcaaaacttagtgcacattccaaaaatcggacaacaccc
attgacctggcagcatattttggcaatgcccgcatagttcgattgttgctgaaccgtgga
gctgacgtaaagaataagtcctcgtttggcaaaggatgtttggactctgctattaaagga
aaccggccagaaacctgcatggaaatagtcaagcacaaacgctggaaagaatgtcttgaa
gtcaaggacgacgaaggattttgtatgatgaaacatctcatcgaaaaatttcccgaagta
gccaagctggtaatggacaaatgcatcgagacttctgatcacatgaaaacagatgtggaa
tattcgaaatcattcaattttgtttttcttgatcctattcctggagaacaaactaataca
gaaggagagcggtactttggtcctaagctcatgttaaaacatggtcaccgtgatctcatt
cttcatcctttgactcgagaactcatgaaagcgaaaaggttgtcttggagattgaagtac
ttttacttggcagccttcatatacacatcattcactttgatcctgacgttccttctgctg
tgtctcaattcacagtccattgacaggcaacacaactccacttctgaattctctagggaa
ttctgtcccagttatggttttccagtctcgagaatggtgacgtcagtaatttcaggcgtc
tcgttgctgagtcatatttacagaatatatgtcgagaaatggagttattggatggatatt
tctaatatattagagttactaagcttttctgccgccattatcacggttggcagtagaaaa
atttggcacaatgaacggtttgaattttcgtttggaatccttgctgttcttctggcatat
atcacaatgatgtcatatttacaaagttcgtttaaagctggtatctacgtcacaatgatg
ttcgaagtgctaaggactcttctgatggtctgtgctgtgttctctattctcctatttgga
tttgccttggtcttccatgtgctgctatcaaaggaagcaaacgcctcaagaaatggtatt
aacctttcctcgaatggcgaggatccctttggtcgtttagatctggcgatgttgaaggtg
ttggatatgatggttggggagctggaatacagtaacttttttgttgacaatacgctgtat
cttcccgatctgacgagatttatttttgccgcattttgttgtttggtgccaatagttttc
atgaacctgttgattggcttggctgtcggtgacattgaatccatccagaaaaatgctgaa
ttgaaacttttggccattcagattgaggacgtttttacatttgaacgacgccttccaaaa
tgtcttcttcgccgctttcacaagtcgagcatcacaaaatatccaaacaaaaagagacat
ttctggagtacaagcctaatggtaaactactag
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