Pocillopora damicornis (lace coral): 113682596
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Entry
113682596 CDS
T05773
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113682596
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdam04040
]
113682596
Ion channels [BR:
pdam04040
]
Ligand-gated channels
Glutamate (ionotropic)
113682596
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Ortholog
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GFIT
Motif
Pfam:
Lig_chan-Glu_bd
Lig_chan
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
113682596
NCBI-ProteinID:
XP_027055562
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MNSKSSVCYTASSLLISLIYHIIFVKITNCYGSGVLPRVTVLSSQTLDLSQWRANLDIDV
VKFPAGNLSFYDALKVAETISRTVQEGNGTKAIIGSGNKFIDRLIAGTLGLLVVPFISIL
RQDEYQGQLYINLSPSTLTEHISIAFKIADQLGCQHVAVFTSSFHRSEILQQIQNQTRKS
YISSSITELHLNDTPIGIARMMTEIFKITVNYNSVLVVMDCSEQDASFLIEATYTVNINP
VQFQWLFLREEENSTDEVISLPINVFGLRSKFDKRQWVQDALLLLNGSLYSSNDQSKFTN
MRSVSSKVTDQFELYRKMLDQAFLGKTGWVQFDEKGNRVATSYDIHITFRENSSSSGEVE
WVTMGSATGHRVSFQRSLWATNVRDHKEILRVVGIEEEPMLIVSKEDVATFSECVLSYPC
TKYKHYDNNSEQNTPIKCCCIGFLIDLLQWLEKDLSLSVELYLGRDGKYGAYNADSKEWD
GMIGDLLSNRADMALSALTTTRMREKYIDFSYPFLHGETKLLISVTPVRVNVEIGFLAPF
DKALWIVFLAIVSGVLATVWLMERISPNRQRIIFAEKDTKFSLSTCMSYIWSNVVKLELE
GKKPQSISARLTTAVFSFSTLIIITTYTAKLAASLVQLDGESPVTGINDPKFQDPPPGFT
FTTLHSSSILSFFTNSDDPAYIKIGRNMIPYTVRSYNEGLEKLKKGEIKAFIFDSPFIDL
GASKMPGCSFKVVGNAIITVAYAIGFPKNSKWRDPVSNLLLKYQKIDYFRKLKEKWFRGG
CFYTGRSSQSAEEMKPVNFGGLFFILGGAIVVCFLILLGECLWSRHERKEGRYTPKRIGQ
SNKSSIIRSFSDEQRKERSQGGNFSTRVRSETIPPFLVE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaaatccagcgtttgttacacagcctcaagtttattaatatcattgatatat
catatcatctttgtgaagataaccaattgttatgggtctggagtgctacctagagtcacc
gtgctttcaagtcagacgcttgatttatcacaatggcgtgctaacctggacatagatgtt
gtaaaatttcctgcgggaaaccttagtttctatgatgctctgaaagtcgcagaaacgatt
tctagaacagtgcaagaaggaaatggaaccaaggctatcatagggtctggtaacaaattc
attgacaggttaatcgcaggcacgcttggattgttggtggttccattcataagtatcttg
aggcaggatgagtatcagggtcagctctacattaaccttagcccatcaacacttacggag
cacattagcattgcttttaaaattgccgatcaacttggttgtcaacatgtcgcagtgttc
acctccagctttcacaggtcagaaattctgcaacagattcaaaatcagacaaggaaatct
tatatctcctcaagcattacagaattgcatcttaatgacacgcctattggcattgcgaga
atgatgacagaaatttttaagatcactgtaaactacaactcagttttggttgtaatggac
tgcagtgaacaggacgcttcattcctcatagaagctacttacaccgtcaatataaaccct
gtgcaatttcagtggttgtttcttagagaggaggaaaatagcactgatgaagtgatatcc
cttcctataaatgtgtttggcctacgttcaaaatttgataaaaggcaatgggtgcaggat
gcattgctcctccttaatggctcgctttattcaagtaacgaccagagtaaatttaccaac
atgagatccgtcagctcaaaagttaccgaccaatttgaactatacagaaaaatgctagat
caggcgttcttgggaaaaacaggatgggttcagttcgacgagaaaggaaaccgagtggcg
actagttatgatattcacatcacattccgagagaactcatcaagttcaggggaagtggaa
tgggttaccatgggatctgcaacaggccatcgagtcagctttcaaaggtcgttatgggcg
accaatgttcgtgatcacaaagaaatacttcgagtggtgggtattgaagaagaaccaatg
ttgatagtaagtaaggaagatgtggctacattcagtgagtgcgttttgagttacccttgc
acaaaatacaagcactatgataacaactccgagcaaaatacaccgataaagtgctgttgt
attggctttctaatagatctcttgcagtggcttgaaaaagacttatctctttcggtggag
ttgtatttgggtagggatggcaagtatggggcttacaatgcggactctaaggaatgggat
ggaatgattggcgatttgctttctaacagagctgacatggctctttcagcgttgactaca
acgagaatgagggaaaaatacattgacttttcttatccatttcttcatggagaaacgaag
ctgctcatctctgtcactccagtaagagttaatgtggaaattgggttcctggcaccgttt
gacaaagccttgtggattgtctttttggctattgtcagtggtgttcttgcaacagtatgg
ctcatggaaagaataagtccgaatcgccaacggataatctttgccgaaaaggacaccaaa
ttcagtttgtcgacatgtatgtcttacatttggagtaatgtagtgaaacttgagttggaa
ggcaagaagccacagagcattagtgctagacttacaactgctgtgttttccttctcaaca
ctgataataattacaacatacacggctaaattggcagcttctcttgttcaactggatgga
gaatcccctgtcacagggattaatgatcctaagtttcaagatcctccgccaggcttcaca
tttaccactcttcatagtagtagtatactgtccttctttacaaacagtgatgatcctgca
tacataaaaataggaagaaacatgattccctatactgtgaggagctacaacgagggcctc
gaaaaactaaagaaaggggaaattaaagccttcatcttcgactcaccattcattgacctt
ggagcttccaagatgcccggatgttcgtttaaagtagtagggaacgcaataattactgta
gcatacgccataggatttcccaaaaactcgaagtggagagatccggtttcaaatctgttg
cttaaataccaaaaaatagattactttaggaaactgaaggaaaaatggtttagaggaggc
tgtttttataccggtcgatcatctcaaagcgctgaagagatgaagcctgttaattttggt
ggccttttctttatattaggtggagcgatagttgtgtgttttcttattttacttggagag
tgcctgtggtcacgccatgaacgaaaggaagggagatatacccctaaaagaatcggacag
agtaacaagtcctcaataattcgttccttctctgacgagcaaagaaaggagcgaagccag
ggtggaaattttagcacgcgtgttcgatctgagacaattcctcctttcttggtagagtag
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