Clostridioides difficile 630: CDIF630_01482
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Entry
CDIF630_01482 CDS
T03885
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pdc
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdc03009
]
CDIF630_01482 (rimO)
Enzymes [BR:
pdc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CDIF630_01482 (rimO)
Ribosome biogenesis [BR:
pdc03009
]
Prokaryotic type
ribosomal protein modification factors
CDIF630_01482 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Imm70
PilO
CLP1_P
NAGidase
Motif
Other DBs
NCBI-ProteinID:
AJP11024
UniProt:
Q18BJ2
LinkDB
All DBs
Position
1522383..1523717
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AA seq
444 aa
AA seq
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MLKIALESLGCSKNLVDAEIMMGILNNKGYKLIGDFEEADVIIVNTCGFIESAKQESIDT
IINFAELKKTGNLKLLIVTGCLAQRYSEELKTEIPEIDAIVGTGSYQNIDKILKELSEIH
QIVSLNDIEFVFNEDLPRYISTPSYMAYLKIGEGCSNNCTYCIIPKLRGKYRSRKFEDII
KEAKKLAESGVKELVVIAQDTTKYGFDLYGKERLSELLEELAKIDGFKWIRVMYSYPESI
TEELIQVIKKYDNICSYFDMPIQHASNNILKLMNRKTTKEDILNKINLIRSNIPDAILRT
TIIVGFPGETEDDFKQLVDFVEEVKFDRLGAFAYSREEDTPADRLPNHIDEEVKIQRRDT
LMMIQQKISEELNDKKIGKTYEVLIEEQIEDNVYTGRTQGDAEEIDSIVYVKSVDNLEVG
EFVSVQINDAMEYDLMGDVLYELA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatagcattggaatcattaggatgctcaaaaaatttagtagatgcagaaata
atgatgggaattttaaataacaaaggctataaattaattggagattttgaagaagctgat
gtaattatagtaaatacatgtgggtttatagagtcagctaaacaagaatctatagatacg
ataataaactttgcagagttaaaaaaaactggcaatttaaagttgttgatagtaacaggg
tgtctagcccaaagatattctgaagaattaaaaactgaaattcctgaaatagatgctata
gtaggaacaggaagctatcaaaatatagataaaatacttaaagaattaagtgaaatacat
caaattgtaagccttaatgatatagagtttgtatttaatgaagatttaccaagatatata
tctacacctagctatatggcctatttaaaaattggagaaggatgttccaataattgtact
tattgtataataccaaaactaagaggtaaatatagaagtagaaaatttgaagatataatt
aaagaagctaagaaattagctgaatctggagtaaaagaacttgtggttatagcacaggat
acgacaaagtatggttttgatttatatggaaaagaaagattatcagaacttttagaagaa
cttgcaaaaatagatggatttaagtggataagggttatgtattcatatccagaatctata
acagaggaattgatacaagttataaagaaatatgataatatatgtagttactttgatatg
ccaatacagcatgcaagtaacaatattttaaaattaatgaatagaaaaactactaaagaa
gatatattaaataaaatcaatctgataagaagtaatataccagatgctatacttagaact
acaataatagtagggtttcctggtgaaacagaagatgacttcaaacaacttgtggacttt
gttgaagaggttaaatttgatagacttggtgcatttgcatattcaagagaagaagataca
ccagcagatagattgccaaaccatatagatgaagaagtaaaaatacaaagaagagatact
ttaatgatgattcaacaaaaaatatctgaagaacttaatgacaaaaagataggaaaaact
tatgaggtgttaatagaagaacagatagaagataatgtatatacaggaagaacacaaggt
gatgcggaagaaattgacagtatagtgtatgtaaaaagtgtagacaatcttgaagtagga
gaatttgtaagtgttcaaataaatgatgcaatggaatacgatttaatgggagatgtttta
tatgaacttgcctaa
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