Pseudomonas denitrificans (nom. rej.): F1C79_01375
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Entry
F1C79_01375 CDS
T09478
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden00300
Lysine biosynthesis
pden01100
Metabolic pathways
pden01120
Microbial metabolism in diverse environments
pden01230
Biosynthesis of amino acids
Module
pden_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F1C79_01375 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pden01002
]
F1C79_01375 (dapE)
Enzymes [BR:
pden01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
F1C79_01375 (dapE)
Peptidases and inhibitors [BR:
pden01002
]
Metallo peptidases
Family M20
F1C79_01375 (dapE)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
QEY70418
UniProt:
A0A9X7R2K9
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Position
complement(276785..277933)
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AA seq
382 aa
AA seq
DB search
MSLSPTLALACELIRRPSVTPVDADCQQMMMQRLDACGFALEPMRIEEVDNFWALRQGRD
GANGPVLCFAGHTDVVPTGPEQAWQHQPFDALIDADGMLCGRGAADMKGSLASMIVATER
FVADYPDHRGSIAYLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLVGDIV
KNGRRGSLGATLSVRGKQGHVAYPHLAKNPIHLAAPALAELAAEHWDNGNDYFPPTSFQI
SNINGGTGATNVIPGELKVIFNFRFSTESTVEGLQQRVAAILDKHGLDWHIDWALSGLPF
LTQPGELLDGVAAAIRAVTGRETTPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVDER
VLASDLDVLTEIYYQTLVRLLA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctcgccgacactggccctcgcctgcgagctgattcgccgtccctccgtcaca
ccggtcgatgccgactgccagcagatgatgatgcagcgcctggacgcctgcggcttcgcc
ctggagcccatgcgcatcgaagaggtagataacttctgggccctgcgccagggtcgcgac
ggcgccaacggccccgtgctgtgcttcgccggccacaccgacgtggtccccaccggcccc
gagcaggcctggcagcaccagccgttcgacgccctgatcgacgccgacggcatgctctgc
ggccgtggtgcggcagacatgaaaggcagcctggcgtcgatgatcgtcgccaccgagcgc
ttcgtcgccgactatccggaccaccgcggcagcatcgcctacctgatcaccagcgacgag
gaaggcccggcccatcatggtaccaaggccgtggtcgagcgcctgaaggcccgtaacgag
cgcctggactggtgcatcgtcggcgaaccgtcgagcaccaccctggtcggtgacatcgtc
aagaacggtcgtcgcggctccctcggcgccaccctcagcgtgcgcggcaagcagggccac
gtggcctacccgcacctggcgaagaacccgatccacctcgccgccccggccctggccgaa
ctggccgccgagcactgggacaacggcaacgactacttcccgccgaccagcttccagatc
tccaacatcaatggcggcaccggcgcgaccaacgtgatccccggcgagctgaaggtgatc
ttcaacttccgcttctccaccgaatccaccgtcgaaggcctgcagcaacgcgtcgcggcg
atcctcgacaagcacggcctggactggcacatcgactgggcgctgtccggcctgccgttc
ctcacccaaccgggtgagctgctcgatggcgtggcggcggcgatccgcgcggtcaccggc
cgcgagaccacgccgtcgacctccggcggcacctccgacggccgcttcatcgccaccatg
ggtacccaggtggtcgagctcggcccagtgaacgccaccatccaccaggtggacgaacgc
gtgctggccagcgacctcgatgtactgaccgaaatctattaccagaccctggtgcgactg
ctggcatga
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