Clostridioides difficile 630Derm: CD630DERM_05080
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Entry
CD630DERM_05080 CDS
T03785
Symbol
tetM
Name
(GenBank) Tetracycline resistance protein Tn5397
KO
K18220
ribosomal protection tetracycline resistance protein
Organism
pdf
Clostridioides difficile 630Derm
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pdf01504
]
CD630DERM_05080 (tetM)
Antimicrobial resistance genes [BR:
pdf01504
]
Gene variants
Tetracycline resistance genes
Others
CD630DERM_05080 (tetM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_C
EFG_III
MMR_HSR1
RF3_C
Septin
FeoB_N
GTP_EFTU_D2
Cerato-platanin
AIG1
Motif
Other DBs
NCBI-ProteinID:
CEJ97036
LinkDB
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Position
1:605329..607248
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AA seq
639 aa
AA seq
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MKIINIGVLAHVDAGKTTLTESLLYTSGAIAESGSVDTGTTRTDTTFLERQRGITIQTAV
TSFQWKDIKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISARDGVQAQTRILFHALNKMG
IPTIFFINKIDQNGIDLSTVYQDIKEKLSMEIIIKQKVELHPNMCVMSCTEPEQWDVVIE
GNDYLLEKYTLGKSLEILELEQEEIRRFQNCSLYPVYHGSAKSNIGIEQLIEVITNKFYS
STYRKKSELCGNVFKIEYSEERQRLAYVRLYGGILHLRDSVRISEKEKIKITEMYTSING
ELCKIDKAYSGEIVILQNEFLKLNSVLGDTKLLPQRERIENPLPLLQTTVEPSKPQQREM
LLDALLEISDSDPLLQYYVDSTTHEIILSFLGKVQMEVTCALLQEKYHVEVKIKKPTVIY
MERPLKKAEYTIHIEVPPNPFWASIGLSVAPLPLGSGVQYESSVSLGYLNQSFQNAVMEG
IRYGCEQGLYGWNVTDCKICFKYGLYYSPVSTPADFRMLAPIVLEQVLKKAGTELLEPYL
SFKIYAPQEYLSRAYNDAPKYCANIVDTQLKNNEVILSGEIPARCIQEYRNDLTFFTNGR
SVCLTELKGYYVTTGESVCQPRRPNSRIDKVRYMFNKIT
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattattaatataggtgttttagctcatgttgacgcaggaaaaactactttgaca
gaaagcttactatatactagtggagcgattgcggagtcaggaagcgtggatacaggcaca
acaagaacggatactacatttttagaacgtcagcgaggaattacaattcagacagcagta
acctcttttcagtggaaagatattaaggtaaatatcatagatactccaggacatatggat
tttttagcagaagtatatcgctcgttatcagttttagatggggcaatcctactaatttct
gcgagagatggagtacaagcacaaactcggatattatttcatgcactaaataaaatgggt
attcccacaatcttttttatcaataagattgaccaaaatgggattgatttatcaacggtt
tatcaagatattaaagagaaactttctatggaaattataatcaaacagaaagtagagctg
caccctaatatgtgtgtgatgagctgtacggaacctgagcaatgggatgtggtaatagaa
ggaaatgattatcttttggagaaatatacacttgggaaatcattggagatattagaactc
gaacaagaggaaatcagaagatttcagaattgctccttgtaccctgtttatcatggaagc
gcaaaaagcaacatagggattgagcagcttatagaagtgataacgaataaattttattca
tcaacatacagaaagaagtctgaactttgcggaaatgtcttcaaaattgaatattcggaa
gaaagacaacgtcttgcatatgtacgcctttatggcggaatcctgcatttgcgggattcg
gttagaatatcggaaaaggaaaaaataaaaattacagaaatgtatacttcaataaatggt
gaattatgtaaaattgataaggcttattccggggaaattgttattttgcaaaatgagttt
ttgaagctaaatagtgttcttggagatacaaagctattgccacagagagagagaattgaa
aatccgctccctctgctgcaaacaactgttgaaccgagcaaacctcaacaaagggaaatg
ttacttgatgcacttttagaaatctccgacagtgacccgcttctacaatattatgtggat
tctacgacacatgaaatcatactttctttcttagggaaagtacaaatggaagtgacttgt
gctctattgcaagaaaagtatcatgtggaggtaaaaataaaaaagcctacagtcatttat
atggaaagaccgttaaaaaaagcagagtataccattcacatcgaagtgccaccgaatccc
ttctgggcttccattggtctttctgtagcaccgcttccattagggagcggagtacagtat
gagagctcggtttctcttggatacttaaatcaatcgtttcaaaatgcagttatggaaggg
atacgatatggctgtgaacaaggattgtatggttggaatgtgacggactgtaaaatctgt
tttaagtatggcttatactatagccctgttagtaccccagcagattttcggatgcttgct
cctattgtattggaacaagttttaaaaaaagctggaacagaattgttagagccatatctt
agttttaaaatttatgcaccacaagaatatctttcacgagcatataacgatgctcctaaa
tattgtgcgaacatcgtagacactcaactgaaaaataatgaggtcattcttagtggagaa
attcctgctcggtgtattcaagaatatcgtaatgatttaactttctttacaaatggacgt
agcgtttgtttaacagagttaaaagggtactatgttactactggtgaatctgtttgtcag
ccccgtcgtccaaatagtcggatagataaagtacgatatatgttcaataaaataacttag
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