Clostridioides difficile 630Derm: CD630DERM_34340
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Entry
CD630DERM_34340 CDS
T03785
Symbol
cobB
Name
(GenBank) Cobyrinic acid A,C-diamide synthase
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf00860
Porphyrin metabolism
pdf01100
Metabolic pathways
pdf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CD630DERM_34340 (cobB)
Enzymes [BR:
pdf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
CD630DERM_34340 (cobB)
6.3.5.11 cobyrinate a,c-diamide synthase
CD630DERM_34340 (cobB)
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Gene cluster
GFIT
Motif
Pfam:
GATase_3
CbiA
AAA_26
Fer4_NifH
AAA_31
SNO
NTPase_1
DUF1611
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CEK00143
LinkDB
All DBs
Position
1:complement(4027129..4028505)
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AA seq
458 aa
AA seq
DB search
MKKILIAGTNSGVGKTTISLGIMQALVKRNMKVQPYKVGPDYIDPSYHTFITGRHSRNLD
SYMLDDEKIKYVVNKSSKDADISVIEGVMGLYDGFGIDLDNCTSSHTSKVLKSPVILVIN
GKSMAASSAAMVLGYKELDKDVNIKGVIVNNVKTNSHYQIIKSSIEKYCNVEVLGYFPPN
NKFSLESRHLGLVPSVEMKSLREKFYTLADEIEHYIDIDRIIEISESDEFESDFDFQTLI
ENNKIKEHVNNKSIAIAYDKAFNFYYRENIELLEELGLEINYFSPLEDASVPNADYIYIG
GGFPEIFGKELEANESMRTSILEAHNNNIPIYAECGGLMYLGEKLLNQEEQEFNMVGIFS
GISKMTSSLKRFGYCIGVAKENTLLSKKGESIKGHEFHHSIFESDEKCVYSMRKERDGNI
VEEWDGGYSKGNTLATYLHTHFYNNLNCIENFLKKGNK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattttaattgcgggtactaatagtggagtaggtaaaacaacaatatcatta
ggaataatgcaagctttggttaagagaaatatgaaagtacagccatataaagtagggcca
gactatatagacccttcatatcacacttttataactggaagacattctagaaatttagat
tcttatatgttagatgatgaaaaaataaagtatgtagtaaataagtcctcaaaagatgca
gatatttcagtaatagaaggtgttatgggcttatatgatggttttggaatagatttagat
aattgtacaagttcacatacttcaaaggtattaaagtcacctgttatattagttataaat
ggtaaatctatggcagcatctagtgctgctatggtacttggatataaggaactagataaa
gatgtaaatataaagggtgttatagtaaataatgtaaagactaatagccattatcaaata
attaagagttctatagaaaaatattgtaatgttgaagtattggggtattttcctccaaat
aacaaattctctttggaatctcgacatctaggattagttcctagtgtagaaatgaaatca
ctaagggaaaaattttataccttagcagatgaaattgaacactatatagatattgacaga
ataattgaaatatcagaaagtgatgaatttgagagtgattttgattttcaaactttgata
gaaaataataaaataaaagaacatgttaataataaatcaatagctatagcatatgataaa
gcattcaatttttattatagagaaaatatagagcttttagaggaacttggtttagaaata
aactattttagccctcttgaagatgcatcagtgccaaatgcagattatatttatattgga
ggaggttttccagaaatatttggaaaagaattagaagcaaatgagtcaatgagaacttcc
atattagaagcacataacaataatatacctatttatgcagaatgtggaggactgatgtac
ctaggtgagaaactattgaatcaagaagaacaagaatttaatatggttggaatatttagt
ggaattagtaagatgacatcttctttaaagagatttgggtactgtattggtgtagccaag
gaaaatactcttttatctaaaaaaggggaatccattaaagggcatgagtttcatcattca
atatttgaaagtgatgaaaaatgtgtatattcaatgagaaaagaaagagatggaaatata
gtagaagagtgggatggtggttatagtaaaggaaacactttggctacatatcttcatact
catttttataataacttaaattgtatagaaaattttttgaaaaaaggaaataagtaa
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