Paracoccus sediminicola: PAF18_06820
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Entry
PAF18_06820 CDS
T09284
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PAF18_06820
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdim01007
]
PAF18_06820
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdim03016
]
PAF18_06820
Enzymes [BR:
pdim01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PAF18_06820
Amino acid related enzymes [BR:
pdim01007
]
Aminoacyl-tRNA synthetase
Class I (A)
PAF18_06820
Transfer RNA biogenesis [BR:
pdim03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PAF18_06820
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1g
Anticodon_2
tRNA-synt_1
tRNA-synt_1c
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
WBU58129
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Position
complement(1391973..1393553)
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AA seq
526 aa
AA seq
DB search
MTTLRDAAMTSKAWPFEEARRVLKRYEKKDPEKGFVLFETGYGPSGLPHIGTFGEVARTT
MIRRAFELISDIPTKLICFSDDMDGMRKVPENVPQQELLHENLQKPLTSVPDPFGEYDSF
GDHNNAMLRRFLDTFGFEYEFMSATEFYKSGAFDPTLLRAAERYDAIMKIMLASLREERQ
QSYSCFLPIHPETGRVLYVPIKNVDAAKGEISFDDEEGRAWTLPVTGGHVKLQWKPDFGA
RWAALDVDFEMYGKDHSTNTPIYDGICEVLGGRKPEHFTYELFLDDQGQKISKSKGNGLS
IDEWLSYAATESLSYFMYQKPKTAKRLWWDVIPKAVDEYHQQLRAYPGQTPEQQLANPVY
HIHRGQVPSSDMVVPFAMLLNLASVAGAKDKEGLWGFIRRYAPDASPETHPQLDEAAGYA
VRYYEDFVAPQRSFRAPDDKERAALEDLSGRLAAWDEPAEAEALQSMVFAVGKEHGFEPL
RAWFQTLYQVLLGADQGPRFGGFIALYGVTETRELIERALNGELAA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccctgcgcgatgccgcgatgacttccaaggcctggcccttcgaagaggcgcgc
cgggtgctgaaacgctatgaaaagaaagaccccgagaaagggttcgtgctgttcgagacc
ggctatggtccctcggggctgccgcatatcggcacgttcggtgaggtcgcgcgcacgacg
atgatccgccgcgccttcgagctgatctctgacattccgaccaagctgatctgtttttcc
gacgatatggacgggatgcggaaagtaccggagaacgtgccgcagcaagagcttctgcac
gagaatttgcagaagccgctgacctcggtgcccgatccgttcggcgaatatgacagcttc
ggggaccataacaacgccatgctgcggcggttcctggacacgttcgggttcgaatacgaa
ttcatgtcggcgaccgaattttacaaatccggcgcgttcgatccgaccctgctgcgcgcc
gccgagcgttatgacgcgatcatgaagatcatgctggccagcctgcgcgaggaacgtcag
cagagctatagctgcttcctgccgatccatccggaaaccggtcgcgttctgtatgtgccg
atcaagaatgtcgatgccgcgaagggcgagatcagcttcgacgacgaggaagggcgggca
tggacgctgccggtcaccggcggccatgtgaaactgcaatggaagccggatttcggcgcg
cgttgggcagcgctggatgtcgatttcgagatgtatggcaaggatcacagcaccaatacg
ccgatctatgacggcatttgcgaggttctcggcggccgcaagcccgagcattttacttat
gagctgtttctggacgatcagggccagaagataagcaagtcgaagggcaacgggctgtcc
atcgatgagtggctgagctatgccgccaccgagagcctgtcctatttcatgtatcagaag
ccaaagacggcaaagcggctctggtgggatgtgatccccaaggcggtggatgaatatcac
cagcagttgcgggcctatccgggacagacgccagagcagcaactggccaatccggtgtat
cacattcatcgcgggcaggtgccctcatcggatatggtcgtgccgttcgccatgctgctg
aaccttgcctcggtggccggggcgaaggataaggaagggctatggggatttatccgccga
tatgcgcccgacgcttctcctgaaacgcatccgcagcttgacgaagccgcaggttatgct
gtccgctactatgaggatttcgtggcgccgcagcgcagctttcgcgcgcccgacgacaag
gagcgcgccgcgctggaggatctgtctgggcggctggcggcatgggacgagccggcagag
gccgaggcgctgcaaagcatggttttcgcggtcggcaaagagcacgggttcgagccgctg
cgcgcctggttccagacgctgtatcaggtgttgctcggtgccgatcaggggccgcgtttc
ggcgggttcatcgcgctttacggtgtgaccgagacccgcgagttgatcgaacgggcgctg
aacggagagctggccgcatga
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