Paracoccus sediminicola: PAF18_10675
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Entry
PAF18_10675 CDS
T09284
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00300
Lysine biosynthesis
pdim01100
Metabolic pathways
pdim01120
Microbial metabolism in diverse environments
pdim01230
Biosynthesis of amino acids
Module
pdim_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PAF18_10675 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdim01002
]
PAF18_10675 (dapE)
Enzymes [BR:
pdim01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PAF18_10675 (dapE)
Peptidases and inhibitors [BR:
pdim01002
]
Metallo peptidases
Family M20
PAF18_10675 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WBU55962
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All DBs
Position
complement(2156174..2157313)
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AA seq
379 aa
AA seq
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MDAAELTARLIRCPSVTPEEAGALTLLSDLLTEAGFECTRVDRNGVPNLFARWGEKGAAR
SFGFNGHTDVVPPGDLASWTHPPFSGHLDEAGTIWGRGATDMKSGVAAFTAAAIELVGKA
PPDGAIILTITGDEEGPGRDGTRALLDWMDAQGERMEVCLVGEPTNPEEFGEMMKIGRRG
SLSYRITARGVQGHAAYPHKVRNPLHALCRFLDRIASEPLDEGSDHFDPSTLQVTTIDCG
NPAGNVVPETATAQFNIRFNDLHDAGSLDARMRGVAEEISAATGVSLTFVPSLSGDSFLT
APGPFVDLVRDVVEAETGRRPVLSTSGGTSDARFVKDHCPVVEFGLVGRFMHEVDERVPS
DEVRALQNVYRRILEAYFA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccgaactgaccgccagattgatccgctgcccttcggtcacaccggaagag
gcgggggccctgaccctgctctcggatctgctgaccgaggccggcttcgaatgcacgcgt
gtggaccggaacggcgtgccgaacctgttcgcgcgatggggtgagaaaggggctgcccga
agcttcggtttcaacggccatacggatgtcgtgccgcctggcgacctggcaagctggacc
catccgcccttttccggccatctcgacgaggcaggcaccatctgggggcgcggcgcgacg
gacatgaaatccggcgtggccgccttcaccgccgccgcgatcgagctggtcggcaaggct
ccgcccgacggtgccatcatcctcaccatcaccggcgatgaggaggggccgggacgtgac
ggcacgcgcgcgctgctcgactggatggatgctcagggcgagcggatggaggtttgcctc
gtgggcgagccgaccaatcccgaagaattcggcgagatgatgaagatcgggcggcgcggg
tcgctcagctatcggatcaccgcgcgcggggtgcagggccatgccgcctatccccacaaa
gtgcgcaatccgctgcacgcgctgtgccggtttctcgaccgcatcgcctctgaaccgctg
gatgagggctcggatcatttcgacccgtccacattgcaggtcaccacgatcgattgcggc
aacccggccgggaacgtggtgcccgagaccgccacggcgcaattcaacattcgtttcaac
gatctgcatgacgcgggcagcctcgacgcgcggatgcgaggcgttgccgaagaaatctct
gccgcgaccggggtgtcgctgacgtttgtacccagtctctcgggagacagcttcctgacc
gcaccgggccctttcgtcgatctggtgcgcgatgtggtcgaggccgagaccggtcgccgg
cccgttctgtccacctcgggcggcacctccgatgcgcgcttcgtcaaggatcactgccct
gtggtagagttcggtctggtcggtcgcttcatgcatgaggtcgatgagcgtgtcccctcg
gatgaggttcgggcgctgcaaaatgtctatcgccgcatcctcgaggcgtatttcgcatga
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