Paraburkholderia dioscoreae: PDMSB3_1481.1
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Entry
PDMSB3_1481.1 CDS
T08115
Symbol
sdaB
Name
(GenBank) L-serine deaminase II
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00260
Glycine, serine and threonine metabolism
pdio00270
Cysteine and methionine metabolism
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
pdio01200
Carbon metabolism
pdio01230
Biosynthesis of amino acids
Module
pdio_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PDMSB3_1481.1 (sdaB)
00270 Cysteine and methionine metabolism
PDMSB3_1481.1 (sdaB)
Enzymes [BR:
pdio01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
PDMSB3_1481.1 (sdaB)
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Gene cluster
GFIT
Motif
Pfam:
SDH_alpha
SDH_beta
Sgf11
Motif
Other DBs
NCBI-ProteinID:
VVD32765
UniProt:
A0A5Q4YW04
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All DBs
Position
II:1525075..1526469
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AA seq
464 aa
AA seq
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MNVSVFDLFKIGIGPSSSHTVGPMIAACRFASHIEDANLLGFVRSVKVDLFGSLGATGKG
HGTDKAVLLGLEGNLPDSIDPDLIEPRLQTIRATRQLVLLGKHAVKFDEREHLGFFRKLM
PGAPGSGIVHPNGMRFQAFDENGQLLVEKEYYSIGGGFVVNREGDRVNGVRAGAQVPYPF
RTGDDLMRVCRETGLSIAQITLRNECAARPEQEVREGLLAIWRAMSACVERGCKVRGELP
GPMHVKRRAADLCAQLRSRSEESLRDPLSMLDWVNLYAMAVNEENAAGGRVVTAPTNGAA
GVIPAVLHYYVKFMHASNDEGIVNFLLTAAAIGIIYKETASISGAEVGCQGEVGVACSMA
AAALAAVMGGTPTQVENAAEIGMEHNLGMTCDPVGGLVQIPCIERNAMGAIKALNAARMA
MKGDGQHYVSLDNVIKTMRETGADMKTKYKETSRGGLAVNVIEC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcagcgtcttcgatctgttcaagatcggcatcggtccttccagctcgcacacg
gtcgggccgatgatcgctgcatgccgcttcgcctcgcatatcgaagacgccaatctgctc
ggcttcgtgcgcagcgtgaaggtcgatctgttcggctcgctcggcgcaaccggcaaaggg
cacggcacggacaaggcggtgctgctgggactcgaaggcaatctgcccgattctatcgac
ccggacctgatcgagccacgcctgcagaccatccgcgcgaccagacaactggttctgctc
ggcaagcatgccgtgaaattcgacgaacgcgagcatctcggcttcttccgcaagctgatg
ccgggcgcgccgggttcgggcatcgtgcatccgaacggcatgcgctttcaggccttcgac
gaaaacggtcaactgctggtggagaaggagtattactcgatcggcggcggcttcgtggtg
aatcgcgaaggcgatcgcgtgaacggcgtgcgcgccggcgcccaggtgccgtatccgttc
cgtaccggcgacgatctgatgcgcgtctgccgcgaaacgggcctgtcgatcgcgcagatc
acgctgcgcaacgagtgcgcggcgcgtcccgagcaggaagtacgcgaagggctgctggcc
atctggcgcgccatgtccgcttgcgtcgaacgcggctgcaaggtgcgcggcgaattgccc
ggcccgatgcacgtgaagcgccgggccgccgatctgtgcgcgcaactgcgctcgcggtcg
gaagagtcgttgcgcgatccgctctccatgctcgactgggtcaacctgtacgcaatggcc
gtcaacgaagaaaacgcggcgggcgggcgcgtcgtcacggcgccgaccaacggcgcggcc
ggcgtgattcccgccgtgctgcactactacgtgaagttcatgcacgcgtcgaacgacgaa
ggcatcgtcaacttcctgctgacggccgcggcgatcggcatcatctacaaggaaacggcg
tcgatctccggcgccgaagtgggctgccagggcgaagtgggcgtggcgtgctcgatggcc
gccgcggcgctcgccgccgtgatgggcggcacgccgacgcaagtggaaaacgctgccgaa
atcggcatggaacacaacctcggcatgacctgtgacccggtcggcgggctcgtgcagatt
ccgtgcatcgaacgcaacgcaatgggcgcgatcaaggcgctgaacgccgcgcgcatggcg
atgaagggcgacggccagcattacgtatcgctcgacaatgtgatcaagacgatgcgcgaa
accggcgccgacatgaagacgaaatacaaggagacgtcgcgcggcgggttggccgtgaac
gtcatcgagtgttga
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