Paraburkholderia dioscoreae: PDMSB3_1484
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Entry
PDMSB3_1484 CDS
T08115
Symbol
soxA
Name
(GenBank) Sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00260
Glycine, serine and threonine metabolism
pdio01100
Metabolic pathways
Module
pdio_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PDMSB3_1484 (soxA)
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PDMSB3_1484 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PDMSB3_1484 (soxA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
Pyr_redox_3
DAO
Pyr_redox
FAD_binding_2
HI0933_like
NAD_binding_7
GIDA
FAD_binding_3
AlaDh_PNT_C
XdhC_C
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
VVD32768
UniProt:
A0A5Q4ZPN3
LinkDB
All DBs
Position
II:1528150..1531152
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AA seq
1000 aa
AA seq
DB search
MSQKDRLPNGGRINRAMPLTFTFNGRQYQGYQGDTLASALLANGEHFVARSWKYHRPRGI
VTAGVEEPNAVVQLETGAYTVPNARATEVELYQGLVATSVNAKPSIEKDRMAVNQKIARF
IPAGFYYKTFMWPRKFWPKYEEVIRDAAGLGKAPEHTDADRYDKCFAHCDVLVVGGGPTG
LAAAHAAALSGARVTLVDDQPELGGSLLSCRAEIDGKPALNWVHKIEDELRQMPDVKILC
RSTAFGYQDHNLVTVTQRLTEHLPVSQRKGTRELMWKIRAKRVILATGAHERPIVFGNND
LPGVMLASAVSTYLHRYAVLPGRNAVVFTNNDDGYQCALDLKAAGAQVTVVDPRAGESKG
TLPALARRYGVKVMSGTVITAAHGKLRVASVELASYPNGQVGAKQGELSCDLLAMSGGWS
PVLHLFAQSGGKAHWHDGKACFVPGKAMQAETSIGACAGDFTLGQGIRFAVDAGVEAARA
AGFIVARPNPVQVAEITEAKMQPLWLVGGRELATRGPKQFIDFQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAVHEWHVENGAAFEDVGNWKRPWYYPKAGEDLPAAVARESLAVRTSV
GILDASTLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLA
DQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
QDIDFANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KAGRKQLVGLLSDDPSFVIPEGSQIVAGPFQGDTAPMLGHVTSSYYSPILKRSIAMAVVK
GGLDKIGETVTIPLASGKQIAAKVTSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgactccccaacggcgggcgcatcaatcgcgcgatgccactgacc
ttcacgttcaacggccgccagtaccagggttatcagggcgacacgctggcctccgcgctg
ctcgcgaacggcgagcatttcgtggcgcgtagctggaagtatcaccgaccgcgcggcatc
gtcacggcgggtgtggaagagccgaatgccgtggtgcaactcgaaaccggcgcatacacg
gtgccgaatgcgcgcgccaccgaagtcgagctgtaccagggactcgtcgccaccagtgtg
aacgcgaagccgagcatcgagaaagaccgcatggcggtcaaccagaagatcgcgcgcttc
attccggcgggcttctattacaagaccttcatgtggccgcgcaaattctggccgaagtac
gaagaagtgatccgcgacgcggccggtctcggcaaggcgccggaacacaccgacgcggac
cgctacgacaagtgctttgcgcattgcgacgtactggtggtgggcggcggcccgaccggc
ctcgcggccgcgcacgcagccgcgttgtccggcgcgcgcgtgacgctggtcgacgatcag
ccggaactcggcggctcgctgctgtcgtgccgcgcggagatcgacggcaagcccgcgctg
aactgggtgcacaagatcgaagacgaactgcggcaaatgcccgacgtgaaaatcctgtgc
cgcagcacggcgttcggctatcaggaccacaacctcgtgacggtcacgcagcggctcacc
gagcatctgccggtatcgcagcgcaagggcacgcgcgaactgatgtggaagatccgcgcg
aaacgggtgattctcgcgaccggcgcgcatgaacggcccatcgtgttcggcaacaacgat
ctgccgggcgtgatgctggcgtcggccgtgtcgacctatctgcatcgctatgcggtgctg
ccgggccgcaacgcggtggtcttcacgaacaacgacgacggctaccagtgcgcgctcgat
ctgaaagcggccggcgcccaggtgacggtggtcgatccgcgcgcgggcgaatcgaagggc
acgctgccggcgctcgcaaggcgctatggcgtcaaggtgatgagcggcacggtgatcact
gcggcacacggcaaactgcgcgtggcttcggtcgaactggcgtcgtatccgaacggacag
gtcggtgcgaagcaaggcgagttgtcgtgcgacctgctcgccatgtccggcggctggagc
ccggtgctgcatctgttcgcgcaatcgggcggcaaggcgcactggcatgacgggaaggcc
tgcttcgtgccgggcaaggcgatgcaggcggaaacgagcatcggtgcctgtgccggcgac
ttcacgctcggccagggcatccgcttcgcggtggatgcgggcgtcgaggcggcgcgcgcg
gcgggcttcatcgttgcacgcccgaatccggtgcaggtggccgagatcacggaagcgaag
atgcagccgctgtggctggtcggcggacgcgaactggctacgcgtgggccgaagcagttc
atcgacttccagaacgacgtctccgctgcggatattttccttgcggcgcgtgaaggcttc
gaatcggtcgaacacgtcaaacgctatacggcgatgggtttcggcaccgaccagggcaag
ctcggcaatatcaacggcatggcgattctcgcgcaggcgctcggcaagacgattcccgag
accggcacgaccacgttccggccgaactacacgccggtcaccttcggcacgtttgccggc
cgcgagctgggcgagtttctcgatccggtgcgcaagacggcggtgcacgagtggcacgtg
gaaaacggcgctgccttcgaggacgtgggcaactggaagcgtccgtggtactacccgaaa
gccggcgaggatctgcccgcggcagtggcgcgcgagtcgctcgcggtacgcacgagcgtt
ggcattctcgacgcctcgacgctcggcaagatcgacattcagggccccgattcggcgaag
ctgctgaactgggtctatacgaatccgtggagcaagctggaagtcggcaagtgccgctat
ggcctgatgctcgacgaaaacggcatggtcttcgacgacggcgtgaccgtgcgcctcgcc
gaccagcactacatgatgacgaccaccaccggcggcgcggcacgcgtgctcacgtggctc
gaacgctggctgcagacggagtggccggacatgcgcgtgcggctcgcgtcggtcacggac
cattgggccaccttcgccgtggtcggtccgaacagccgcaaggtgctgcagaaggtctgc
caggacatcgacttcgccaacgcggcgttcccgttcatgagctatcgcgaaggcaccgtg
gcgggcgccgcgtcgcgcgtgatgcgcatcagcttctcgggcgaactcgcttatgaagtg
aacgtgccggccaacgtcggacgcgcggtatgggaagcgctgatggccgcgggcgcggaa
ttcgacatcacgccgtatggcaccgaaacgatgcacgtgctgcgtgcggagaagggctac
atcatcgtcggccaggatacggacggttcgatgacgccgtacgacctcggcatgggcggg
ctcgtcgccaagtcgaaggactttctcggcaagcgttcgctgacccgttcggacacggcg
aaggccgggcgcaagcaactggtcggcttgctttcggacgacccgtcgttcgtgataccc
gaagggtcgcagatcgtcgccggaccgttccagggcgacacggcgccgatgctcggccac
gtcacgtcgagctactacagtccgatcctgaagcgctcgatcgcgatggcggtcgtgaag
ggcggtctcgacaagatcggcgagacggtcacgattccgcttgcgagcggcaaacagatt
gcagcgaaggttaccagttcggtgttctacgacagcgaaggagcacgtcaacatgtggaa
tga
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