KEGG   Paraburkholderia dioscoreae: PDMSB3_1484
Entry
PDMSB3_1484       CDS       T08115                                 
Symbol
soxA
Name
(GenBank) Sarcosine oxidase subunit alpha
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
pdio  Paraburkholderia dioscoreae
Pathway
pdio00260  Glycine, serine and threonine metabolism
pdio01100  Metabolic pathways
Module
pdio_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pdio00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PDMSB3_1484 (soxA)
Enzymes [BR:pdio01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     PDMSB3_1484 (soxA)
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     PDMSB3_1484 (soxA)
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C Pyr_redox_2 FAD_oxidored NAD_binding_8 Pyr_redox_3 DAO Pyr_redox FAD_binding_2 HI0933_like NAD_binding_7 GIDA FAD_binding_3 AlaDh_PNT_C XdhC_C Thi4 Lycopene_cycl
Other DBs
NCBI-ProteinID: VVD32768
UniProt: A0A5Q4ZPN3
LinkDB
Position
II:1528150..1531152
AA seq 1000 aa
MSQKDRLPNGGRINRAMPLTFTFNGRQYQGYQGDTLASALLANGEHFVARSWKYHRPRGI
VTAGVEEPNAVVQLETGAYTVPNARATEVELYQGLVATSVNAKPSIEKDRMAVNQKIARF
IPAGFYYKTFMWPRKFWPKYEEVIRDAAGLGKAPEHTDADRYDKCFAHCDVLVVGGGPTG
LAAAHAAALSGARVTLVDDQPELGGSLLSCRAEIDGKPALNWVHKIEDELRQMPDVKILC
RSTAFGYQDHNLVTVTQRLTEHLPVSQRKGTRELMWKIRAKRVILATGAHERPIVFGNND
LPGVMLASAVSTYLHRYAVLPGRNAVVFTNNDDGYQCALDLKAAGAQVTVVDPRAGESKG
TLPALARRYGVKVMSGTVITAAHGKLRVASVELASYPNGQVGAKQGELSCDLLAMSGGWS
PVLHLFAQSGGKAHWHDGKACFVPGKAMQAETSIGACAGDFTLGQGIRFAVDAGVEAARA
AGFIVARPNPVQVAEITEAKMQPLWLVGGRELATRGPKQFIDFQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAVHEWHVENGAAFEDVGNWKRPWYYPKAGEDLPAAVARESLAVRTSV
GILDASTLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLA
DQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
QDIDFANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KAGRKQLVGLLSDDPSFVIPEGSQIVAGPFQGDTAPMLGHVTSSYYSPILKRSIAMAVVK
GGLDKIGETVTIPLASGKQIAAKVTSSVFYDSEGARQHVE
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgagccagaaagaccgactccccaacggcgggcgcatcaatcgcgcgatgccactgacc
ttcacgttcaacggccgccagtaccagggttatcagggcgacacgctggcctccgcgctg
ctcgcgaacggcgagcatttcgtggcgcgtagctggaagtatcaccgaccgcgcggcatc
gtcacggcgggtgtggaagagccgaatgccgtggtgcaactcgaaaccggcgcatacacg
gtgccgaatgcgcgcgccaccgaagtcgagctgtaccagggactcgtcgccaccagtgtg
aacgcgaagccgagcatcgagaaagaccgcatggcggtcaaccagaagatcgcgcgcttc
attccggcgggcttctattacaagaccttcatgtggccgcgcaaattctggccgaagtac
gaagaagtgatccgcgacgcggccggtctcggcaaggcgccggaacacaccgacgcggac
cgctacgacaagtgctttgcgcattgcgacgtactggtggtgggcggcggcccgaccggc
ctcgcggccgcgcacgcagccgcgttgtccggcgcgcgcgtgacgctggtcgacgatcag
ccggaactcggcggctcgctgctgtcgtgccgcgcggagatcgacggcaagcccgcgctg
aactgggtgcacaagatcgaagacgaactgcggcaaatgcccgacgtgaaaatcctgtgc
cgcagcacggcgttcggctatcaggaccacaacctcgtgacggtcacgcagcggctcacc
gagcatctgccggtatcgcagcgcaagggcacgcgcgaactgatgtggaagatccgcgcg
aaacgggtgattctcgcgaccggcgcgcatgaacggcccatcgtgttcggcaacaacgat
ctgccgggcgtgatgctggcgtcggccgtgtcgacctatctgcatcgctatgcggtgctg
ccgggccgcaacgcggtggtcttcacgaacaacgacgacggctaccagtgcgcgctcgat
ctgaaagcggccggcgcccaggtgacggtggtcgatccgcgcgcgggcgaatcgaagggc
acgctgccggcgctcgcaaggcgctatggcgtcaaggtgatgagcggcacggtgatcact
gcggcacacggcaaactgcgcgtggcttcggtcgaactggcgtcgtatccgaacggacag
gtcggtgcgaagcaaggcgagttgtcgtgcgacctgctcgccatgtccggcggctggagc
ccggtgctgcatctgttcgcgcaatcgggcggcaaggcgcactggcatgacgggaaggcc
tgcttcgtgccgggcaaggcgatgcaggcggaaacgagcatcggtgcctgtgccggcgac
ttcacgctcggccagggcatccgcttcgcggtggatgcgggcgtcgaggcggcgcgcgcg
gcgggcttcatcgttgcacgcccgaatccggtgcaggtggccgagatcacggaagcgaag
atgcagccgctgtggctggtcggcggacgcgaactggctacgcgtgggccgaagcagttc
atcgacttccagaacgacgtctccgctgcggatattttccttgcggcgcgtgaaggcttc
gaatcggtcgaacacgtcaaacgctatacggcgatgggtttcggcaccgaccagggcaag
ctcggcaatatcaacggcatggcgattctcgcgcaggcgctcggcaagacgattcccgag
accggcacgaccacgttccggccgaactacacgccggtcaccttcggcacgtttgccggc
cgcgagctgggcgagtttctcgatccggtgcgcaagacggcggtgcacgagtggcacgtg
gaaaacggcgctgccttcgaggacgtgggcaactggaagcgtccgtggtactacccgaaa
gccggcgaggatctgcccgcggcagtggcgcgcgagtcgctcgcggtacgcacgagcgtt
ggcattctcgacgcctcgacgctcggcaagatcgacattcagggccccgattcggcgaag
ctgctgaactgggtctatacgaatccgtggagcaagctggaagtcggcaagtgccgctat
ggcctgatgctcgacgaaaacggcatggtcttcgacgacggcgtgaccgtgcgcctcgcc
gaccagcactacatgatgacgaccaccaccggcggcgcggcacgcgtgctcacgtggctc
gaacgctggctgcagacggagtggccggacatgcgcgtgcggctcgcgtcggtcacggac
cattgggccaccttcgccgtggtcggtccgaacagccgcaaggtgctgcagaaggtctgc
caggacatcgacttcgccaacgcggcgttcccgttcatgagctatcgcgaaggcaccgtg
gcgggcgccgcgtcgcgcgtgatgcgcatcagcttctcgggcgaactcgcttatgaagtg
aacgtgccggccaacgtcggacgcgcggtatgggaagcgctgatggccgcgggcgcggaa
ttcgacatcacgccgtatggcaccgaaacgatgcacgtgctgcgtgcggagaagggctac
atcatcgtcggccaggatacggacggttcgatgacgccgtacgacctcggcatgggcggg
ctcgtcgccaagtcgaaggactttctcggcaagcgttcgctgacccgttcggacacggcg
aaggccgggcgcaagcaactggtcggcttgctttcggacgacccgtcgttcgtgataccc
gaagggtcgcagatcgtcgccggaccgttccagggcgacacggcgccgatgctcggccac
gtcacgtcgagctactacagtccgatcctgaagcgctcgatcgcgatggcggtcgtgaag
ggcggtctcgacaagatcggcgagacggtcacgattccgcttgcgagcggcaaacagatt
gcagcgaaggttaccagttcggtgttctacgacagcgaaggagcacgtcaacatgtggaa
tga

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