Paraburkholderia dioscoreae: PDMSB3_1588.1
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Entry
PDMSB3_1588.1 CDS
T08115
Name
(GenBank) PAS domain S-box
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio02020
Two-component system
pdio02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PDMSB3_1588.1
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PDMSB3_1588.1
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pdio02022
]
PDMSB3_1588.1
02035 Bacterial motility proteins [BR:
pdio02035
]
PDMSB3_1588.1
Enzymes [BR:
pdio01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
PDMSB3_1588.1
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
PDMSB3_1588.1
Two-component system [BR:
pdio02022
]
CheA family
CheA-CheYBV (chemotaxis)
PDMSB3_1588.1
Bacterial motility proteins [BR:
pdio02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
PDMSB3_1588.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheB_methylest
CheR
HATPase_c
Response_reg
PAS_10
PAS_4
HisKA
CheR_N
PAS_9
PAS
PAS_8
PAS_7
TMF_TATA_bd
PAS_3
CENP-F_leu_zip
Fez1
DUF1664
Leu_zip
HATPase_c_2
HAUS-augmin3
Sec8_N
Mod_r
IFT57
ATG16
HMMR_N
Motif
Other DBs
NCBI-ProteinID:
VVD32872
UniProt:
A0A5Q4YXS4
LinkDB
All DBs
Position
II:complement(1634163..1638197)
Genome browser
AA seq
1344 aa
AA seq
DB search
MNDANNISPTLGAATVPRIVAIGASAGALHALSLFFRAASTIPHDIAFAIVVHLAPGAES
HLPELLAKDTSLTVSAIEDGVTLRAGHVYVIPPKVSVVIEQAMFRLRPAVERPTIPMPID
EFFTSLAADQHDRAIGIVLTGANADGSAGLRAIKAAGGMVMAQAPDTAEHDSMPAHAVAT
GLVDYVLPIEKMPAVLFDYIARSSEGMLPVSGKSGAMVDLEPVLRALAAAGSDFRGYKRG
TLERRIARRMTVNQVDSLDAYCAVLRTSVEEAQALSLDMMIGVTEFFRDPEAWRALAERV
LGPLLDEPGGDQPLRVWVPGCATGEEAYSMGMLLTEQIEKRKLTRSFMILASDVNRVALA
RARQGIYPPGVALPVGEERLERFFRPHGNDYQIDQALRETILFTPQNLIADPPFSRVDLI
SCRNLLIYLEPEAQQRVFEVFHFALNPKRYLFLGRSESTDPDSGQFQEVSRAWRIYQRSP
VTTAVVSGYRFSAPGGRREEFPSASRGGNRSKGYAELVNNTLLEEHHAASVLINAAHQVL
YASGSTDEYLRQPTGEPTGNILDMAREGLRLKLRIVLRRATQDEAAAPVSEVVSDGGAPA
VRITVTRPFDTAHTGKALLVIFARAPVAERPASLAPTGVDSDLWHLESELRTTQVELGST
IEELEESNSELRVSNEEILSMNEELRSANEELETSKEELQALNEQLNLVNSQLGQKVRQL
EVLSEDVTNLLASTEIATLLLDRHAVIKRFTPSAARIFGLALADIDRPITNVLGNPLGDA
LLEDVQRVVSAQTGQAEKEIQTLTGEWYVRRITPYIAVQGTPPAGVVVTWNDITHVKASD
ERSRRLAAVVQDSNDAMTVFDLSGRLIAWNRAATAIYGYTEAEALCMTVSDMLPPGARQD
HLDFIRYAEHNEALHSYETQRVTKSGRVLDIWITLSILSDDQGHAVAIATTERELTDRSL
SNTQLRERAERLAQADRRKNEFLAMLGHELRNPLAALCSAGDLLASETVDVRQKAWAVGV
IQRQGRAMTQLVNEMLDLTRITSGSIKLNRQAVTLETVVQSALEVCRPIVEERHHTLSVA
LPEEPVLMYVDPTRLSQVIENIVINAAKYTEPGGKIDLTATKNGRRLSLRVKDNGAGIAP
SMLNTLFDMFVQGPLPYGQLHNGLGVGLSVVRRLVELHGGSVEAVSDGKTGSEFIVDLPL
GLIPPGPDQAGSPQNPVKALPRRILIIDDNADASEALAMILASEGHVVATRLDGQQGLEA
SATFRPDVVLLDIGLPGMDGYEVAQKLRGSAATRDTLLIAVTGYGQPGDQLRSAAAGFDH
HLVKPVDIEALKGLLAAKMKPRDA
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgccaataatatttctccgacacttggggctgctactgttccacgcatcgtc
gccatcggcgcatcagccggcgctcttcatgcgttgagcctgttttttcgtgcggcgtct
accatccctcacgatattgccttcgccatcgtggtccacctcgcgcccggcgccgaaagc
caccttccggaactgctggccaaagacacctctctgaccgtatcggccatcgaggacggc
gtcacgctgcgcgcgggccatgtctatgttatcccgccgaaagtatccgtcgtgatcgag
caggccatgttcaggctgcggcccgcggtcgagcgtcccaccattccgatgccgatcgac
gagttcttcacttcgctggctgcggaccaacacgatcgcgcgatcgggatcgtgctcacg
ggcgcgaacgcggacggttcggcaggcctgagagccatcaaggccgcaggcggaatggtg
atggcgcaggcgcccgatacggccgaacacgattcgatgccggcgcatgcggtcgcgacg
ggactggtcgactacgtgctgccgatcgaaaaaatgcccgctgtgctgttcgattacatc
gcgcgctccagcgagggaatgttgccggtgtccggcaaatccggggcaatggtcgacctg
gagccggtgctcagggcactggccgcagccggctccgatttcaggggctacaaacggggg
acgctcgagcgccgtattgcccggcgcatgacggtcaatcaggtggacagcctcgacgcg
tattgcgcagtattgagaacctcggtcgaggaagcccaggcgctgagtcttgacatgatg
atcggcgtgacggaattctttcgcgatccggaggcttggcgtgctcttgctgaacgcgtc
ctcggcccgcttctcgacgagccgggaggcgatcagcccctgcgggtctgggtgcccgga
tgcgcgacgggggaagaggcctattcgatgggcatgctgctcacggagcagatcgagaaa
cgtaagctcacccggtcattcatgattctcgcgtccgacgtgaaccgggtagccctcgcg
cgtgcccgccagggaatctatccaccgggtgtcgcgttgcctgttggtgaagaacggctc
gagcgcttttttcgcccacacggcaatgattatcagatcgaccaggcgctgcgcgaaacg
atcctgttcacaccgcagaacctgattgccgatccaccgttttcccgggtcgacctgatc
agctgccgcaatctgctgatctacctcgaacccgaggcgcagcagcgcgtgttcgaggtg
tttcattttgcgctcaacccgaagcgctatctgtttctgggccgatcggaaagtaccgat
ccggactccggccagtttcaggaagtctccagggcctggcgcatctaccagcgcagtccg
gtcaccaccgcggtcgtgtccggctaccggttctccgcaccagggggaaggcgggaggag
ttcccctccgcgagtcgtggcggcaaccgtagcaagggctacgcggaactggtcaacaac
acgctgctcgaagagcaccacgcggcatcagtgctgatcaatgccgcgcaccaggtgctc
tatgcgagcggttcgaccgacgagtacctcagacaacccactggcgagccgacaggcaac
attctcgacatggcgcgcgaagggctgcgtctgaagctgaggatcgtgttgcgccgcgcg
acccaggacgaggccgccgcgccggtcagtgaagtcgtatcggacggtggcgcgcccgcg
gtgaggatcacggtgacccggccattcgacacggcgcacacgggcaaggcattgctcgtc
atcttcgcgcgggctccggtggccgagcggcctgcctcgctggcgccaaccggtgtggac
tccgatctctggcacttggagagcgaacttcgcaccacgcaagtcgagcttggcagcacg
atcgaggaactggaagaaagcaatagcgaattgcgggtgtcgaacgaagaaatcctttca
atgaacgaggaactgcgctcggccaacgaggagctcgagacatcgaaagaagaactgcag
gcgctcaacgagcagttgaatctggtcaactcccaactcgggcagaaggtccgccagttg
gaggtgctcagcgaagacgtgacgaaccttctggccagcactgaaatcgccacgttgctg
ctcgaccggcacgcggtgatcaaacgttttactccgagtgcggcgcggatcttcggtctg
gcgttagccgacattgaccgcccgatcacgaatgttctcggcaatccgctgggcgacgcc
ctgctggaggatgtccagcgggtagtgtcggcgcagaccggccaggccgaaaaggaaatc
cagacgttgacgggagagtggtacgttcgacgtatcacgccgtatatcgcggttcaggga
acaccgcccgcgggggtggtggtgacgtggaacgacattacccatgtgaaggcctccgac
gaacggtcccggcgcctcgccgcggtcgtccaggattcgaacgacgccatgacggtgttc
gatctgagtggccgcctgattgcctggaaccgggccgcgaccgcgatttacggctatacg
gaggccgaagctttatgcatgacggtgtccgatatgctgccgccgggcgccagacaggat
cacctcgatttcatccgctacgccgagcacaacgaggcgctgcattcctatgaaacccag
cgggtcactaaaagcggtcgcgtgctcgacatctggatcactctgtcgattctctcggac
gatcagggtcacgccgtggctattgccacgaccgagcgcgaactcaccgatcgcagtctg
agtaacacccagcttcgggagcgcgccgaacgtctggcacaggccgaccggcgcaagaac
gaattcctggccatgcttggccacgaactgcgcaatccgcttgccgcgctgtgttcagcc
ggcgacctgctcgcctcggaaaccgtcgatgtgcgccagaaagcctgggctgtcggcgtc
atacagcggcaaggtcgggcaatgacccaactggtcaacgaaatgctggatctcacgcgc
attacgagcggcagcatcaagctgaatcgccaggcagtgacgctggaaacggtcgtccag
agcgcgctcgaggtttgccggccgattgtcgaagaacggcatcacaccttgtcggttgcg
ctgccggaagagccggtgctgatgtatgtcgaccccacgaggctatcgcaggtcattgag
aacatcgtgatcaacgcggccaagtacacggagcctggcgggaaaatcgatctcaccgcg
acaaaaaacggccgtcggctttcgcttcgagtcaaggataacggcgcggggatcgcccct
tcgatgctcaacacgctttttgacatgttcgtccagggtccgttgccctacggccagctt
cataacgggctcggggtaggcctgtccgtggtccggcggctggtcgagttgcatggcggg
tcggtcgaggctgtcagtgacggcaagacaggcagcgagttcatcgtcgatcttccgctg
ggcttgatcccgcccggcccggaccaggccggttcaccgcagaatccggtcaaggcgctc
ccccgcaggatcctcatcatcgacgataacgccgacgccagcgaggcgctggccatgatt
ctggcgagcgaagggcacgtggtggcgacacggctggatggccagcaggggctcgaagcc
tccgccactttcaggccggacgtcgtgctcctcgatattggattgcccggaatggacggc
tatgaggtcgcgcagaaattacgcgggtctgccgcgacgcgagacacgctgttgatagcc
gtcaccggctacgggcagccgggcgaccaactcagatccgcagcggcgggatttgatcac
cacctggtcaagccggtggatatcgaggcgttgaaaggtctgctcgctgcgaaaatgaaa
ccccgggatgcgtaa
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integrated database retrieval system