Paraburkholderia dioscoreae: PDMSB3_1703
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Entry
PDMSB3_1703 CDS
T08115
Symbol
sucA
Name
(GenBank) 2-oxoglutarate decarboxylase, thiamin-requiring
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00020
Citrate cycle (TCA cycle)
pdio00785
Lipoic acid metabolism
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
pdio01120
Microbial metabolism in diverse environments
pdio01200
Carbon metabolism
pdio01210
2-Oxocarboxylic acid metabolism
Module
pdio_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pdio_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PDMSB3_1703 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PDMSB3_1703 (sucA)
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PDMSB3_1703 (sucA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
VVD28159
UniProt:
A0A5Q4Z6C1
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All DBs
Position
I:1757099..1759960
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AA seq
953 aa
AA seq
DB search
MMKQFQSNSYLFGGNAPYVEEMYEAYLDNPASVPENWRSYFDALQNVPASDGSNANDVAH
GPIVESFAQRAKANAFIPRGAGGGEDLATARKQVYVQSLIGAYRFLGSQWANLDPLKRRE
RPAIPELEPAFYDFTEADMDQEFSATNLYFGFERASLREIVKALRDTYCGTIGAEYMYIS
DPEQKRWWKEKLESIRSTPNFSNEKKKHILNRLTAAEGLERFLHTKYVGQKRFSLEGGES
FIASMDEVVRHGGANGVQEIVIGMAHRGRLNVLVNTLGKMPADLFAEFEGKHVDDLPAGD
VKYHKGFSSDVSTEGGPVHLSLAFNPSHLEIVNPVVEGSAKARMDRRGDDSGLQVLPVQI
HGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQIGFTTSDPRDSRSTLYCSDVVKM
IEAPVLHVNGDDPEAVVLATQLAIDFRMQFHKDVVVDIVCFRKLGHNEQDTPAVTQPLMY
KTIAKHPGTRALYAEKLVQQGVITAADADEYVKAYRKAMDEGHHTVDPVLSNYKSKYAVD
WVPFLNRKWTDAADTAVPLAELKRLAERITTIPENFKVHPLVERVINDRRAMGRGEAKLD
WGMGEHLAFASLVASGYAVRLTGQDSGRGTFTHRHAVLHDQNRERWNDGTYVPLQNIAEG
QAKFTVIDSVLSEEAVLGFEYGYSTAEPNTFVAWEAQFGDFVNGAQVVIDQFISSGEVKW
GRVSGLTMLLPHGYEGQGPEHSSARIERFLQLCADHNMQVVQPTTPAQIFHLLRRQMIRL
FRKPLIVATPKSLLRHKEAVSDLSELAKGAFQPIIGEIDEAIDAKKVKRVVACSGRVYYD
LLAHRRESKSNDVAIIRIEQLYPFAHKQFEAEMKKYDNATEVVWVQDEPQNQGPWFYIEH
HLKDGMKEGQKLAYSGRPASASPAVGYYAKHYEQQKALIEGAFGRLKSASIAK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcaattccagtcgaactcttacctgttcggcggcaatgctccgtacgtagaa
gaaatgtacgaagcgtatctcgataatccggcgtcagtgcccgagaactggcgtagctat
ttcgacgcgttgcagaacgtccctgcatcggatggcagcaatgccaacgacgtggcccac
ggcccgatcgtcgaatcgtttgctcaacgggccaaggctaatgccttcatcccgcgcgga
gcaggtggcggcgaagatctcgctaccgctcgcaagcaggtttatgtgcagtccctcatc
ggcgcatatcgcttcctcggctcgcaatgggccaacctcgatcccctgaagcgccgcgaa
cgtcccgctattcccgaactcgaaccggcgttctacgacttcaccgaagccgacatggac
caggagttcagcgccacgaatctgtatttcggattcgagcgtgcttcgctgcgcgagatc
gtcaaggcattgcgcgacacgtactgcggcacgatcggcgccgagtacatgtatatcagc
gatccggaacagaagcgctggtggaaagagaagctcgaatcgatccgttccacgccgaac
ttctcgaacgaaaagaaaaagcatatcctgaatcgcctgacggccgctgaaggcctcgag
cgcttcctgcacaccaagtacgtcggccagaaacgcttctcgctcgaaggcggcgaaagc
ttcatcgcgtcgatggacgaagtcgtgcgtcacggcggcgccaacggcgttcaggaaatc
gtcatcggcatggctcaccgtggccgtctgaacgtgctggtcaatacgctcggcaagatg
ccggccgacctgttcgccgaattcgaaggcaagcacgtcgacgatctgccggctggcgac
gtgaagtaccacaagggtttctcgtcggacgtttcgaccgaaggcggcccggttcacctg
tcgctcgcgttcaacccgtcacacctcgaaatcgtcaacccggtggtcgaaggctcggcc
aaggcccgtatggaccgtcgcggcgacgacagcggcctgcaagtgctgccggtgcagatc
cacggcgacgcggccttcgcgggccagggcgtggtgatggaaacgctgaacctcgcgcaa
acgcgcggttacggcacgcacggcacgctgcatatcgtcatcaacaaccagatcggcttc
acgacgtcggatccgcgcgactcgcgctccacgttgtactgctcggacgtcgtcaagatg
atcgaagcgccggtgctgcacgtgaacggtgacgatcctgaagcggtggttctggctacg
caactggctatcgacttccggatgcagttccacaaggacgtcgtcgtcgacatcgtctgc
ttccgcaagctgggtcacaacgagcaggacacgccggccgtcacgcagccgctgatgtac
aagaccattgccaagcacccgggcacgcgcgcgctgtacgctgaaaaactggtgcagcaa
ggcgtgatcacggctgccgacgcggacgaatacgtcaaggcttaccgcaaggccatggac
gaaggtcatcacacggtcgacccggtgctctcgaactacaagagcaagtacgcggtggat
tgggtgccgttcctgaaccgcaagtggaccgacgccgccgataccgcagtgccgctcgcg
gaactgaagcgccttgctgagcgcatcaccacgattccggaaaacttcaaggttcacccg
ctggtcgagcgcgtcatcaatgaccgtcgcgcgatgggccgtggcgaagcgaagctcgac
tggggcatgggcgaacacctggcattcgcgtcgctggtcgcgtcgggctatgcagttcgc
ctgaccggtcaggactcgggccgcggcacgttcacgcaccgtcacgcggtgctgcacgat
cagaaccgcgagcgctggaacgacggcacgtacgtaccgctgcagaacatcgccgaaggt
caggccaagttcacggtgatcgactcggtgctgtcggaagaagcagtgctgggcttcgaa
tacggttactcgaccgctgagccgaatacgttcgtcgcgtgggaagcgcagttcggcgac
ttcgtgaacggagcgcaagtcgtgatcgaccagttcatctcgtcgggcgaagtgaagtgg
ggccgcgtgtcgggtctcaccatgctgctgccgcacggctacgaaggtcagggtccggag
cactcgtcggcacgtatcgagcgtttcctgcaactgtgcgcagaccacaacatgcaggtc
gttcaaccgaccacgccggcgcagattttccacctgctgcgccgtcagatgatccgcctg
ttccgcaagccgctgatcgtcgccacgccgaagtcgctgctgcgccacaaggaagccgtg
tcggatctgtccgaactggcgaagggcgcgttccagccgatcatcggcgaaatcgacgaa
gccatcgacgcgaagaaggtcaaacgcgtggtcgcgtgctcgggccgcgtgtactacgac
ctgctcgcacatcgccgcgaatccaagtcgaacgacgtcgcgatcatccgtatcgaacag
ctctatccgttcgcgcacaagcagttcgaagcggaaatgaagaagtacgacaacgcgacc
gaagtggtgtgggtgcaggacgagccgcagaatcaaggcccgtggttctacatcgagcac
cacctgaaggacggcatgaaggaagggcagaagctggcatacagcggacgtccggcttcg
gcctcgccggcagtcggttattacgcgaagcactacgagcagcagaaggcgctgatcgaa
ggcgctttcggccggctcaagagcgcgtcgatcgctaaataa
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