KEGG   Paraburkholderia dioscoreae: PDMSB3_2227.1
Entry
PDMSB3_2227.1     CDS       T08115                                 
Symbol
polB
Name
(GenBank) DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
pdio  Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:pdio00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdio03400]
    PDMSB3_2227.1 (polB)
Enzymes [BR:pdio01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PDMSB3_2227.1 (polB)
DNA repair and recombination proteins [BR:pdio03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    PDMSB3_2227.1 (polB)
SSDB
Motif
Pfam: DNA_pol_B DNApolII_N DNA_pol_B_exo1 DNA_pol_B_2 P63C DENR_N
Other DBs
NCBI-ProteinID: VVD33511
UniProt: A0A5Q4ZDM3
LinkDB
Position
II:2315388..2317763
AA seq 791 aa
MTELEQGFILTRHWRDTPAGTEVDFWLATDSGPRHIRLRPQPSVAFIPVEHRERAETILR
REAPLDLRPLDLCDFQHRPVMGLYCPQYRQLTGFEKRLKQGGVDVYEADIFPPERYMMER
FITAPVWFSADAQSNGHSGPLLNSELKPATGYRPPLKLVSLDIETSAHAELYSIALEGCG
QRQVYMLGPPNGNAGALDFDLEYCETRAHLLEKLNAWLERHDPDAIIGWNLVQFDLRVLQ
QHAEQYRIPLRLGRGGAVMEWREHGLKQNHFFAGAAGRLIIDGIEALRSATWSFPSFSLE
HVARSVLGEGKSIDNPYQRMDEIQRRFDEDKPALAQYNLKDCELVTRIFAKTELLPFLLE
RASVTGLPADRSGGSVAAFTHLYMPRMHRQGYVAPNLGDVAGAASPGGFVMDSRPGLYDS
VLVLDYKSLYPSIIRTFLIDPVGLVEGMLNPADDQSVPGFLGARFSRTRHCLPSIVGQVW
QGRETAKRENNKPLSQALKIIMNAFYGVLGSTGCRFFDPRLASSITMRGHEIMHATRELI
QGEGYEVIYGDTDSTFVWLKHAHSEEDASRIGRALVEHINAWWRENLRERFGLDSALELQ
FERHYRRFFMPTIRGAEEGSKKRYAGLTVMPDGREDIVYKGLETVRTDWTPLAQQFQQEL
YRRIFTRQPYQDYVRDYVRDTLEGKLDDQLVYRKRVRRPLGEYERNVPPHVRAARVADEF
NRRQGRPLQYQNGGWISYVMTVAGPEPLETLRSAIDYEHYLTRQLQPVADAILPLLRDDF
ITLMSGQKPLF
NT seq 2376 nt   +upstreamnt  +downstreamnt
ttgactgagcttgaacagggtttcatcctgacccgacattggcgggacacacccgccggc
acggaagtcgatttctggctggcaacggacagcgggccccgtcacatccgtctgcgccct
cagccttcggtggcgttcattcccgtcgagcatcgtgagcgggccgaaacgatcctgcgc
cgcgaagcaccgctcgatctgcgcccgctcgatctctgcgactttcagcatcgcccggtc
atgggactttattgcccgcagtaccggcaattgacggggttcgagaaacgcctgaagcaa
ggcggcgtcgacgtctacgaagccgacatcttcccgccggagcgctacatgatggagcgc
ttcatcacggcgccggtgtggttcagcgcagacgcgcagagcaacggccacagcggcccg
ctccttaacagcgaactcaaaccggccacgggctatcgcccgcccttgaagctggtctcg
ctcgatatcgagaccagtgcccacgccgagttgtactcgatcgcgctggaaggttgcgga
cagcgccaggtgtatatgctgggcccacccaatggcaatgcgggcgcgctcgacttcgac
ctcgaatactgcgaaacccgcgcacacttgctggaaaaactgaacgcgtggctggagcgg
catgatcccgatgcgatcatcggctggaatctggtgcagttcgatctgcgtgtgctgcag
cagcacgccgaacaatatcgcataccgctgcggctcggccgcggtggtgcggtgatggaa
tggcgcgagcacggactcaaacagaaccatttcttcgccggcgccgcggggcggctgatt
atcgacggcatcgaggcactgcgttccgcgacgtggagtttcccttcgttcagtctcgaa
catgtcgcgcgttccgtgctgggcgaaggcaagtcgatcgacaatccatatcagcgcatg
gacgaaatccagcgccgcttcgacgaggacaagcccgcgctcgcgcagtacaacctcaag
gactgcgagttggtcacgcgcattttcgcaaaaacggagttgctgccgttcctgctggaa
cgcgcgagcgtcacggggctgccggcggatcgcagcggcggatcagtggccgcgttcacg
catctgtatatgccgcgtatgcatcggcaaggctatgtcgcgcccaatctcggcgacgtg
gcgggcgccgcgagccccggcggcttcgtgatggattcgcgccccggcctctacgattcc
gtgctggtgctggactacaagagcctctatccgtccattatccgcacctttttgatcgac
cccgtcggcctggtggaaggcatgctgaatcccgccgacgatcaatccgtgccgggcttt
ctcggcgcgcgtttctcgcgcacgcgccattgtttgccgtcgatcgtcgggcaggtctgg
caagggcgcgaaacggccaaacgcgagaacaacaagccgctttcgcaggcgttgaagatc
atcatgaacgccttttacggcgtgctgggatcgaccggttgccgtttcttcgatccgcgt
ctcgcctcgtcgatcaccatgcgtggccacgaaatcatgcatgccacgcgcgaactgatt
cagggcgaaggctacgaggtcatttacggcgacacggattcgaccttcgtgtggctcaag
catgcgcacagcgaggaagacgcgagccgcatcggccgcgcgctggtcgaacatatcaat
gcatggtggcgggagaatctgcgggagagattcgggctcgacagcgcgctcgaactgcaa
ttcgagcggcactaccggcgcttcttcatgccgaccattcgcggcgccgaggaaggcagc
aagaaacgctacgcaggcctcacggttatgccggacggccgcgaggacattgtctacaaa
ggactcgaaacggtacgaacggactggacgccgctcgcgcaacagtttcagcaggaactg
taccggcgcattttcacgcggcaaccgtatcaggattacgtacgcgactatgtacgcgat
acgctcgaaggcaagctcgacgaccagctcgtgtatcgcaagcgcgtgcgccggccgctc
ggcgaatacgagcgcaacgtgccgcctcacgtgcgcgcggcgcgtgtggcggacgagttc
aatcggcggcaagggcgcccgctgcaatatcagaacggcggctggatcagttatgtcatg
acggttgccggacccgagccgctggaaacgctgcgctcggcgatcgattacgaacactat
ctgacgcgacagttgcagcccgtcgccgacgcgatcctgccgctgctgcgcgatgatttc
atcactttgatgtcgggccagaagccgctgttctga

DBGET integrated database retrieval system