Paraburkholderia dioscoreae: PDMSB3_2485
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Entry
PDMSB3_2485 CDS
T08115
Symbol
ybcF
Name
(GenBank) putative carbamate kinase
KO
K00926
carbamate kinase [EC:
2.7.2.2
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00220
Arginine biosynthesis
pdio00230
Purine metabolism
pdio00910
Nitrogen metabolism
pdio01100
Metabolic pathways
pdio01120
Microbial metabolism in diverse environments
pdio01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
PDMSB3_2485 (ybcF)
09104 Nucleotide metabolism
00230 Purine metabolism
PDMSB3_2485 (ybcF)
09105 Amino acid metabolism
00220 Arginine biosynthesis
PDMSB3_2485 (ybcF)
Enzymes [BR:
pdio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.2 Phosphotransferases with a carboxy group as acceptor
2.7.2.2 carbamate kinase
PDMSB3_2485 (ybcF)
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Gene cluster
GFIT
Motif
Pfam:
AA_kinase
BES1_N
Motif
Other DBs
NCBI-ProteinID:
VVD28941
UniProt:
A0A5Q4YTC8
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All DBs
Position
I:2562758..2563669
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AA seq
303 aa
AA seq
DB search
MRILIALGGNALLRRGEPMTMARQLDNIRRAAKQIALLADGNQLVVAHGNGPQVGLLALQ
AAAAGGAENTAPLDVLDAESEGMIGYLLEQELANALPATRHVATLLTRVEVDPHDPAFAH
PTKPIGPVYTKAQAEELAQRNGWSIAPDGTDFRRVVASPKPQRIAALKPVEWLVEHDVIV
IAAGGGGIPVTLAADGQTRTGIEAVIDKDLCSALLAADVGADLLLIATDVDAVYADWHSP
NQRALREISAAQLRSIAFPAGSMGPKVEAACDFVTRTGKRAVIGSLENIEAMAAGTAGTQ
IRP
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctgatagcgctgggcggcaacgcgctactgcgccgcggcgaaccgatgacg
atggcgcgccaactcgacaatatccgccgtgccgcgaagcagatcgcgctgctggccgat
ggcaaccagctggtggtcgcgcacggcaacggtccccaggtcgggctgctcgccttgcag
gccgccgccgccggcggcgcggaaaacaccgcgccgctcgacgtgctcgacgccgagtcg
gaaggcatgatcggctatctgctcgaacaggaactggccaacgcattgcccgccacccgg
catgtcgcgaccttgctcacgcgcgtcgaggtggaccctcacgatcccgccttcgcgcac
ccgaccaaaccgatcggtcccgtttatacgaaggcgcaagccgaagaattggcgcagcgc
aatggctggagcattgcaccggacggaacggacttcaggcgcgtcgtagcatcgccgaag
ccacagcgcatcgcggcgctgaagccggttgaatggctcgtggagcacgacgtgattgtg
atcgcggccggcggcggaggcattccggtcacgcttgcggcggacggtcaaacccgcacg
ggtatcgaggccgtgatcgacaaggatctgtgcagcgcgctgctcgccgccgatgtcggc
gccgatctgctgctcatcgcgaccgacgtggacgcggtatacgcggactggcactcgccg
aaccagcgtgcgctgagggagatatcggcggcgcaattgaggtcgatcgcgtttcccgcc
ggctcgatggggcccaaggtcgaagcggcgtgcgacttcgtcacacgcaccggcaaacgc
gcggtgatcggctcgcttgagaatatcgaggcaatggcggccggcacggcgggcacgcag
atcaggccttaa
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