Pediococcus damnosus: ADU72_1773
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Entry
ADU72_1773 CDS
T04321
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pdm
Pediococcus damnosus
Pathway
pdm00730
Thiamine metabolism
pdm01100
Metabolic pathways
pdm01240
Biosynthesis of cofactors
pdm04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
ADU72_1773
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
ADU72_1773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdm03016
]
ADU72_1773
Enzymes [BR:
pdm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
ADU72_1773
Transfer RNA biogenesis [BR:
pdm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
ADU72_1773
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
ATP_bind_3
Dehyd-heme_bind
Motif
Other DBs
NCBI-ProteinID:
AMV67698
UniProt:
A0A0R2HLZ6
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Position
1735360..1736577
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AA seq
405 aa
AA seq
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MQYTEIMVRYGELSTKGKNQRDFVSRLGGNIRKSLHNFPKLEIYPKRDRTHVTLNGEDSE
AVIERLKQVFGIQNFSPSLKVDRNMKAIHEGVLKMMTDQLKPGMTFKINTRRSDHNFEMD
TNELNDDLGGFVLDHFPEAVVKMHHPDLILRVEVRNNGVFLSSETIQGAGGLPVGTAGKG
MMMLSGGIDSPVASYLGMKRGVDMEMIHFFSPPYTSEQALAKAKELTSHLAAYAGSLQFI
QVPFTKIQEEIKEKVPEGYLMTVQRRMMLRIAVAIAKKRGGKAIFNGESLGQVASQTMES
MEAINDVTNMPILRPVISLDKTEIIKKAKEIGTYDLSILPFEDCCTIFAPPAPKTKPDTE
RTRYYEKRIDVEGLMKEAIDGVQVSEIKAGQNFLNQNEDVFAELL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatacagagattatggttcgttacggcgaattatcaacaaaaggtaaaaatcaa
cgcgattttgtaagccgcttgggtggcaacatccgtaagagtcttcataactttcccaaa
cttgagatttatcccaaacgagatcggactcatgtgacattgaatggcgaagactcagaa
gctgttattgaacggctgaaacaagtgtttgggattcaaaatttttcaccatctcttaaa
gttgatcgaaacatgaaggccattcacgagggcgttttgaaaatgatgactgaccagcta
aagccaggaatgacgtttaagatcaatacacgtcgatcagatcacaactttgaaatggat
accaatgagcttaatgacgatttaggcggttttgtattagatcattttcctgaagcagtg
gttaaaatgcatcatccagatcttattttgcgagttgaagtaagaaataacggtgtgttt
ctttcgagtgaaacgattcaaggggctggtggattgccagtgggaactgctggtaaagga
atgatgatgttatccggtggaattgactcaccagttgctagttacctgggaatgaaacgt
ggcgttgacatggaaatgatccacttctttagtccgccatataccagtgaacaggcgttg
gctaaggctaaagagcttacttcacacttagcagcctatgccggaagtttgcaatttatt
caggtaccttttactaaaattcaggaagagattaaagaaaaggttcctgagggttactta
atgacagttcaacgtcgaatgatgttaaggattgcagtggcaattgctaagaaacgtgga
ggaaaggccatttttaatggtgagtctctggggcaagttgcttcccaaacgatggagagt
atggaagctattaatgatgtgactaatatgccaatcttgcgcccagtgatctctttagac
aaaactgaaattattaaaaaagcaaaagagattgggacttatgatttatcaattttgcca
tttgaagattgttgtactatttttgcaccaccagcgccaaagacaaaacctgatacagaa
cgaacccgttattatgaaaagcggattgatgttgaagggttaatgaaagaggccattgat
ggcgttcaggttagcgaaataaaagcaggccaaaatttcttgaaccaaaatgaagacgtt
tttgcggaattactttaa
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