Prevotella denticola: HMPREF9137_1352
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Entry
HMPREF9137_1352 CDS
T01459
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pdn
Prevotella denticola
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdn03009
]
HMPREF9137_1352 (rimO)
Enzymes [BR:
pdn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HMPREF9137_1352 (rimO)
Ribosome biogenesis [BR:
pdn03009
]
Prokaryotic type
ribosomal protein modification factors
HMPREF9137_1352 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
TRAM_2
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
AEA21310
LinkDB
All DBs
Position
complement(1588849..1590153)
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AA seq
434 aa
AA seq
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MKKNQIDIVTMGCSKNLVDSELIMKQFEANGYHCTHDAENPQGEIAVINTCGFIEAAKEE
SINTILEFANRKKNGQLNRLYVMGCLSQRYKDELEAELPEVDKFYGKFNYKQLLSDLGKA
DIPACNGVRHLTTPHHYAYVKIAEGCDRHCAYCAIPLITGRHHSRTVEDVLDEVKGLVAQ
GVKEFQIIEQELTYYGVDLDGKHHITELISRMADIEGVEWIRLHYAYPNQFPLDLLDVIA
RKPNVCKYLDIAFQHISDHMLGRMHRHVTKQETLDLIAEIRRRVPGIHLRTTLLVGFPGE
TEKDFEELKTFVREVRFERMGAFAYSEEEGTYSATHYEDDVPEKVKQQRIDELMKIQQGI
SEELEGEKVGRVFKVIIDRTEGEYYIGRTEFCSPEVDPEVLIPIEGKTLQTGRFYDVRIT
DSDEFDLFGEVVRQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaccagatagacatcgtaactatgggctgctctaagaatctcgtcgactcg
gagcttatcatgaagcagtttgaagccaacggctatcattgtacacatgatgcagaaaat
ccgcagggtgagattgccgtcattaacacctgcggattcatagaagctgctaaggaggag
agtatcaatacgattctcgaatttgcaaacagaaagaagaatggacagctcaacaggctt
tacgtcatgggatgtctctcacagcggtataaagacgaactggaggcagagcttccggaa
gtggacaagttctatgggaaattcaactataagcagctgctgagcgatcttggaaaggcc
gacataccggcctgcaacggtgtccgccatcttactacaccgcaccactatgcctatgtg
aagattgccgaaggatgtgaccgtcattgtgcctattgtgccattccgctgattacgggc
cggcatcattcgcgtacagtcgaggatgtactggacgaggtgaagggacttgtagcccaa
ggtgtgaaggaatttcagattatcgagcaggaattgacttactatggtgtcgaccttgac
ggaaagcaccatatcactgaactgatttcccgtatggctgacatagagggagttgaatgg
atccggcttcattatgcctatccgaatcagttcccccttgaccttcttgacgtaatcgcc
cggaaaccgaatgtatgcaagtatctggatattgctttccagcatatttccgaccacatg
ctcgggcgtatgcatcgtcatgtaaccaagcaagagacactcgacttgatagccgaaata
cgccgcagggtaccgggtatccatctccgcacaacacttctggtgggcttccccggagag
acagaaaaggacttcgaggagttaaaaacattcgtcagagaggtccgcttcgaacggatg
ggggcttttgcctattcggaggaagagggaacatacagtgcgacacattatgaagatgat
gttccagagaaggtcaaacagcagcggattgatgagctgatgaagatccagcaaggcatc
tctgaggagttggaaggcgagaaggttggcagggtcttcaaggtcattatcgaccgtaca
gagggtgaatattatatcggccgcacggagttctgttcgccagaggtggatccggaagtt
ctcattccgatagaaggaaagaccttgcagacaggcaggttctatgatgtccgtattact
gattctgacgaattcgaccttttcggagaagttgtcagacagtag
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