KEGG   Penicillium digitatum: PDIP_84690
Entry
PDIP_84690        CDS       T04849                                 
Name
(RefSeq) DNA-directed RNA polymerase subunit
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
pdp  Penicillium digitatum
Pathway
pdp03020  RNA polymerase
pdp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PDIP_84690
  09124 Replication and repair
   03420 Nucleotide excision repair
    PDIP_84690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdp03021]
    PDIP_84690
   03400 DNA repair and recombination proteins [BR:pdp03400]
    PDIP_84690
Transcription machinery [BR:pdp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PDIP_84690
DNA repair and recombination proteins [BR:pdp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PDIP_84690
SSDB
Motif
Pfam: RNA_POL_M_15KD eIF3g
Other DBs
NCBI-GeneID: 26236783
NCBI-ProteinID: XP_014532625
UniProt: K9FAL7
LinkDB
Position
Unknown
AA seq 113 aa
MSASPSSTAGGDTKPSDQIHFKFCRECSNLLYPKEDRVNNQLMFTCRTCHVGEPASSHCV
YQNHLHSQVGDTAGVTQDVTSDPTDEDLLEFAPPVGESLESSEVEPRASPPAL
NT seq 342 nt   +upstreamnt  +downstreamnt
atgtctgccagcccttcgtccacggctggtggcgacaccaagccgtcggatcaaattcac
ttcaaattctgccgtgaatgctccaacctgctctaccccaaggaggatcgtgtcaacaac
cagttgatgtttacgtgccgcacctgccatgttggcgagcctgcttcctctcactgtgtc
taccaaaaccacctccacagccaagtcggcgacactgccggtgtcactcaggatgtgaca
tctgaccccacggacgaggatctcctcgagtttgcgccgcctgtgggtgaaagcctagag
tcctctgaagtcgagccccgggcgtctcccccagctctgtaa

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