Polynucleobacter duraquae: CL55_00017060
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Entry
CL55_00017060 CDS
T04207
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pdq
Polynucleobacter duraquae
Pathway
pdq03030
DNA replication
pdq03410
Base excision repair
pdq03420
Nucleotide excision repair
pdq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CL55_00017060
03410 Base excision repair
CL55_00017060
03420 Nucleotide excision repair
CL55_00017060
03440 Homologous recombination
CL55_00017060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdq03032
]
CL55_00017060
03400 DNA repair and recombination proteins [BR:
pdq03400
]
CL55_00017060
Enzymes [BR:
pdq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CL55_00017060
DNA replication proteins [BR:
pdq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CL55_00017060
DNA repair and recombination proteins [BR:
pdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CL55_00017060
NER (nucleotide excision repair)
GGR (global genome repair) factors
CL55_00017060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
AKD26039
UniProt:
A0A0E3V1C7
LinkDB
All DBs
Position
complement(1659260..1662085)
Genome browser
AA seq
941 aa
AA seq
DB search
MTKHRLLLVDGSSYLYRAFHAMPDLRNGAGDPTGAIYGMVNMMRRARSELKADHIACVFD
AKGKTFRDEMYPEYKAHRSPMPEDLVKQIEPIHAMVKALGWPVLMVSGVEADDVIATLAS
QATQAGWETIISTGDKDLAQLVNASVTLINTMTNEKLDINGVIEKFGVPPERIVDYLSII
GDTVDNVPGVPKAGPKTANKWLAEFGDLDNLMANADQVKGVVGENLRNSLEWLPQARQLI
TVKTDCDLSPHLPGLDDLHAKPEDAPLLRELFERYAFKTWLRDVERQLSGAVPEAVSDFD
LAGSPIKNTAEANVKDAVKKFGPTATEATTALSQETTDLHGAIAKRYECVVDEMALDRWI
KKIEGAALTAVDTETTSLDALAAELVGISLCVTPGEACYIPVAHRNGEAQLSRELVLARM
KPWLESATNLKLGQNLKYDSHIFANYGVALQGITFDTMLESYVLESHMPHNMDNLAERHL
GMKTIKYEEVCGKGVHQIGFDQVDLKIATDYAAEDADITLRLHHVLWPQIQASPGLLYIY
GNIEMPAMRVLGIMERNGIRIDSALLSQQGQEVGKRLLALEGEIHKLAGQPFNIQSPKQI
AEILFGQLELPVIKKTPSGAPSTDEEVLQKLAEDYPLPARILDYRSLAKLMSTYIEKLPR
MADPKTGRVHTSFSQATAVTGRLASSDPNLQNIPVRTEEGRRIREAFIPAEGCKLLSADY
SQIELRIMAHIAEDENLLAAFAAGKDVHQATAAEIFGVPLESVNSEQRRYAKVINFGLIY
GMSAFGLAGNLGIERSAAQNYIAKYFDRYPGVAQYMERTRLEARENGYVETVFGRRLWLP
EIKGSGPRRQGAERAAINAPMQGTAADLIKLAMIAVENWLEQEQLKTRMLLQVHDELVFD
VPLDELELLQAKLPDLMCKVAELKVPLVVGIGIGDNWEEAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacatagactcttgttggtagacggctctagctacctctatcgcgcctttcat
gccatgccagacctcagaaatggggcaggtgacccaacgggagccatctatggaatggtg
aatatgatgcgccgagcccgctcagaactcaaggctgatcacattgcctgtgtttttgat
gccaaaggcaagactttccgggatgaaatgtatcccgagtacaaagcgcatcgctccccc
atgcctgaggatttggtaaaacagattgagccgatccatgccatggtgaaagccttgggc
tggccggtattaatggtttctggggttgaggctgatgatgtgattgccaccttggctagt
caagcaactcaggctggctgggagaccattatttctactggcgacaaagatttggcccag
ttagtgaatgcctctgtcaccttaattaatacgatgaccaatgagaagttggacatcaat
ggtgtgattgaaaaatttggcgtacctccagagcgcatcgtagattacctctccatcatt
ggcgacacggtcgataacgtaccgggcgttcctaaggccggccctaaaacagcaaacaaa
tggttggctgagtttggtgatttagataatttgatggcgaatgccgatcaagtaaaaggt
gttgtaggtgaaaacttacgaaatagtttggagtggcttccacaagcacgacaactcatt
accgtcaaaaccgattgcgatttatcgccgcatcttccaggcttagatgacctgcatgcg
aaacctgaagacgcgccgctcttgcgtgagttgtttgagcgctatgcatttaagacttgg
ttacgtgacgtggagaggcagttaagtggtgcagttcctgaggccgtcagtgattttgat
ttggctggtagccccatcaaaaatactgccgaagcaaatgtaaaagatgcagttaaaaag
tttggccccactgccacagaagcgaccactgccttatcgcaagaaacaacggatctgcat
ggagcgattgcaaaacgctatgagtgcgtagttgatgaaatggcgctggatcgttggatt
aaaaaaattgaaggcgctgctcttacggcagttgatactgagaccactagcttagatgca
ctggctgcagagcttgtcggtatttcgctttgcgtcacccctggagaggcttgttatata
ccggtagcgcatcgtaatggagaagctcagctcagtcgagaactggttttggcgcgcatg
aagccttggctagaaagcgcgactaatttaaagctagggcaaaacctcaagtacgacagt
catatctttgcgaactatggcgttgctttgcaaggtattacttttgacaccatgttggaa
tcttatgtgctcgaatcgcatatgcctcacaacatggataacttagccgagcgacatctc
ggcatgaaaactattaagtatgaagaggtatgcggtaagggcgtccatcagattggcttt
gatcaagtagatctgaaaattgccaccgactacgcagcagaagatgctgacattactcta
cggttgcaccatgtattgtggccacaaattcaggcaagtcctggccttctttacatttat
ggaaatatcgagatgccagcaatgcgggtcttgggcatcatggagcgtaatgggattcgg
attgactctgccttgctatctcagcaaggtcaagaagttggcaaacgactgttagctcta
gagggtgagattcataagctagctgggcaaccatttaatattcaatcccctaagcagatc
gcagagattttatttgggcagttagagctccccgtaattaaaaagacaccatcgggtgcg
ccatcgactgatgaggaagtgctgcaaaagttggcggaagactatcccttacctgcgcgt
atcttggattaccgcagtctcgctaaattgatgtcgacttatatcgagaagctcccacgt
atggctgaccctaaaacgggacgagtacatacgagtttttctcaggcgactgcggtgact
ggacgtttggcttcaagcgatccgaacttgcagaacattcctgtgcgcacggaagagggc
cgtcgcattcgggaagcgttcattccggctgagggttgtaagttactttctgccgactat
tctcaaattgaattgcgcatcatggcgcacattgctgaggatgaaaatctattagctgca
ttcgctgctggtaaagacgtacaccaagctaccgctgctgagatctttggagtgccatta
gaaagcgttaattcagagcagcgccgctatgccaaggtcattaactttggcttaatttat
ggcatgagtgcctttggtctagccggtaatctgggtattgagcgctcagcagcccaaaac
tacattgctaagtactttgatcgttatccgggagtggctcagtatatggagcgcactcgc
ttggaggccagagagaatggttatgtcgagacggtctttggtaggcgtctatggctccca
gaaattaaggggagtggtcctcgccgccaaggagcagagcgggctgcaattaatgcgcca
atgcaggggacagcggccgacctgatcaaattggccatgattgcggtcgaaaactggtta
gaacaagagcagttgaagacccgcatgctccttcaggtccacgatgagctggtatttgat
gtgccgctagatgagctggagcttttgcaagcaaagctacctgatttaatgtgcaaggta
gctgaactaaaggttcctttggtagttggtattgggattggcgataattgggaagaagcg
cactaa
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