Photobacterium damselae subsp. damselae: CAY62_03090
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Entry
CAY62_03090 CDS
T04927
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds00730
Thiamine metabolism
pds01100
Metabolic pathways
pds01240
Biosynthesis of cofactors
pds04122
Sulfur relay system
Module
pds_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CAY62_03090
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CAY62_03090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pds03016
]
CAY62_03090
Enzymes [BR:
pds01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CAY62_03090
Transfer RNA biogenesis [BR:
pds03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CAY62_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
ARR48646
UniProt:
A0A1X9TZ79
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All DBs
Position
I:685313..686761
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AA seq
482 aa
AA seq
DB search
MKFIVKPHPEIFVKSDSVRKRFIKILESNLRIILKRQSDTVSIYNRRFHLEVTEPDTSKR
EAIVATLTQTPGIHHVLEVQQTEFKDLHDIYEQTFALVAPNLEGKTFCVRAKRTGQHDFT
SIELERYVGGGLNQNIETARVKLKNPDVTVNIEVERENLNLVLERHQGLGGFPLGTQEDV
LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQVSHFLWNKYGSSAKVKFI
AVDFEPVVAEILEKVDDGQMGVVLKRMFMRAAGQVAEHFGIQALVTGEALGQVSSQTLTN
LRHIDGVTDTLILRPLINWDKEDIINMARHIGTEDFAKTMPEFCGVISKKPTVKAAKEKL
ETEEAKFDFSILDRVVKEARVMDIRDIEKQSQEQAPEVELVSEIAGGAVVLDIRSPDEED
ESPLEIDGVEVKHLPFYKLATQFGDLPQDKTYLLYCARGVMSRLQALYLKENGFDNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgttaagccccatccagagatctttgttaaaagcgattcagtacgtaag
cgctttattaaaattttagaatcgaatcttcgtattattctaaaacgtcaatctgacact
gtatcgatttacaaccgtcgttttcacctagaagtgactgaacctgatacgtcaaagcgc
gaagctattgtagcaacgctaacccagacaccaggtattcatcatgtacttgaagttcag
caaacggaatttaaagatcttcatgatatttatgagcaaactttcgctctagttgcgcca
aaccttgaaggtaaaacattctgcgttcgtgctaaacgtactggtcagcatgactttacc
tctattgagttagagcgttacgttggtggcggtttaaatcagaatattgaaaccgcgcgc
gttaagcttaaaaacccagatgtaactgttaatatcgaagttgagcgtgagaacctaaac
ttagtgcttgagcgtcatcaaggtcttggtggtttccctctaggtactcaagaagatgta
ctaagccttatttcaggtggtttcgactcaggtgtttctagctacctacatattaagcgt
ggttcaaaggttcactactgcttctttaatctaggtggtcctgcgcacgaaattggcgta
aaacaagtttctcatttcctttggaacaaatacggctcctctgccaaagtgaaatttatc
gcggtagattttgagcctgttgttgcagagatccttgaaaaagtagatgacggccaaatg
ggcgtggtgcttaagcgtatgtttatgcgtgccgcaggtcaggtcgctgagcattttggt
attcaagctctcgttactggtgaggcgttaggtcaggtatcgagtcaaactctgactaac
ctacgtcatatcgatggtgttactgatacattgattcttcgtcctctgattaactgggat
aaagaagatattattaatatggctcgtcacattggtacggaagattttgccaaaaccatg
cctgaattctgtggtgtgatctcgaaaaagccgacggttaaagcggcaaaagagaaattg
gaaacagaagaagcgaagtttgatttctctattcttgatcgtgtagtgaaagaggcgcgt
gtaatggatattcgcgacatcgagaaacagagccaagagcaagctccagaagttgaatta
gtatcagaaatcgcaggcggtgctgtggttcttgatattcgtagccctgatgaagaagat
gaaagcccattagaaatcgatggtgttgaagttaaacatcttccattctacaagttggcg
actcagtttggtgacttaccacaagataagacttacctactgtactgtgctcgtggcgtg
atgagtcgactacaagcgttatacttaaaagaaaacggttttgataacgttaaagtatat
cgtccgtaa
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