Paenibacillus durus: PDUR_16185
Help
Entry
PDUR_16185 CDS
T03297
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pdu
Paenibacillus durus
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdu03009
]
PDUR_16185
Enzymes [BR:
pdu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PDUR_16185
Ribosome biogenesis [BR:
pdu03009
]
Prokaryotic type
ribosomal protein modification factors
PDUR_16185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
PDEase_I_N
Motif
Other DBs
NCBI-ProteinID:
AIQ13276
UniProt:
A0A089HMS2
LinkDB
All DBs
Position
complement(3674423..3675754)
Genome browser
AA seq
443 aa
AA seq
DB search
MTEKINIVTLGCEKNLVDSEIMSGLVHERGYALVDRKEEATVIIVNTCGFIDEAKEESVN
TILELAELKESGNLKALIVSGCLTQRYKAELMEEMPEIDGIVGTGDFHNIVQIVDEAVRG
SRPVWVGNPVFNYEEALPRKVSTPRYTTYVKIAEGCDNNCTFCSIPIMRGAFRSRSIESI
LAEVRTLAAQGVKEISLIAQDSTNYGTDLYEEFKLPELLNRVSEVDGIEWVRLHYAYPGF
FTEELIQTMANNPKICKYVDMPLQHSEDSILKRMRRPGRQRDIRELIARIREMIPGVSLR
TSLIVGFPGETEEDFQRLCEFVSEVGFDRLGVFTYSNEEGTPASRLPDQVPDEVKEWRAN
TLMELQRKVTQDRGSRFVGQVLDVLVERYDGRSDVYIGRSQYDAPEIDGEVFVKGSNIDI
GEITKVRITHAFEYDLSGEEVLQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaagattaacattgtaacacttggctgcgaaaaaaatttggtagattcggag
attatgtccggcctggttcatgaacgtggatatgcgcttgtggaccgtaaagaagaagct
accgtcattattgtaaatacgtgcggatttatcgatgaagccaaggaggaatccgtcaat
acaattcttgagcttgcggagctcaaggagagcggcaatcttaaggcgctgatcgtatcg
ggctgcttaacccagcgctataaggcggagctgatggaggagatgccggagatcgacgga
attgtcggaacgggagattttcacaacatcgttcagattgttgatgaagccgtaagagga
agcaggccggtatgggttgggaatccggtctttaattatgaggaggcgctgccccgtaag
gtatcgacgccgcgttatactacctatgtcaaaattgcggaaggctgcgataacaattgc
acgttctgcagtatcccgattatgcgcggagcgttccgcagccgttccatagagtcaatt
ctggcagaggtaaggacactagcggcgcaaggagtgaaggagatcagcctaatcgctcag
gactccaccaattacggaaccgatctgtacgaggaattcaagctgcctgagctgctaaac
cgcgtaagcgaagtggatggcattgaatgggttagattgcattatgcctaccctggcttt
ttcaccgaagagctgattcagacgatggcgaataatccgaagatctgcaaatacgtggac
atgccgctccagcacagtgaagactcaattctcaaacgcatgcgcagacccggacgccag
cgggatatccgcgagctgattgctcgaatccgggagatgattcccggcgtgtcgctgcgc
acttcgcttattgtcggttttcccggcgagactgaagaggattttcagcgcttgtgtgag
tttgtgagcgaggtcggttttgatcggctgggggtatttacttactcgaacgaagaggga
actccggcttcgcgcctgccggaccaggttccggatgaggtgaaggaatggcgcgccaac
acattaatggagcttcagcgcaaggttacccaggatcggggcagccggtttgtgggccaa
gttctcgatgtgctggtggaacgctatgacggccgcagcgatgtctatatcggccgctcg
cagtacgatgcgcctgagattgacggagaagtatttgttaaaggcagcaacatcgacatc
ggggagattacgaaggttcggataacccatgctttcgaatatgatttgtcaggggaggaa
gtgcttcagtga
DBGET
integrated database retrieval system
