Prunus dulcis (almond): 117614329
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Entry
117614329 CDS
T07328
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117614329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117614329
Enzymes [BR:
pdul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117614329
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117614329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
117614329
NCBI-ProteinID:
XP_034198992
LinkDB
All DBs
Position
1:complement(42880459..42897710)
Genome browser
AA seq
1184 aa
AA seq
DB search
MTSKREEKMKKMFGKPSAESEDYAAVRELFRHHIESFDHFVTAGLETMLNKIKPIEVVDS
STGTSLAIWFGKPFLFPPQKEESKTARGKLLPFECRQAKLSYTGKFMADVYFKYNDGPAI
RENFNFGQLPIMLMSKLCHLRGANPEKLVSCKEESSEMGGYFVLNGLERVVRLVILPKRN
YPTSMVRNSFRDRKEGYTDKAVVIRCAREDQSSVTVKLYYLRNDSARLGFWIQGREYLLP
VGLVLKALIDTTDHEIYKNLTCCYVEKDESCDVKKYEKGKGNVGTQLVGERAHIILDEVR
DFITRRQCLEHIGGHFRPLMRGLEDESDLSVVGEAVLEDYIFVHLDKGFDKFNLLIFMVQ
KLFSLMDQTSLPDNPDALQNHEVLLPGHLITIYLKEKLEDWLQRAKKLLQDQINNKSKTF
DFCSLVNVKKVLDKNPSKHISLAVENMLKTGRLVTQSGLDLQQRAGLTVQAERLNYLRYL
SHFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSYFDA
QGNIRNFLNIRESILTVLSELQMISSVPKLVQAGPPANLSVLLDGCVVGSISSKVVEKVV
AQLRRLKVSASSVIPDDLEVGYVPLSSRGAYPGLYLFTSPSRFVRPVKNISIPSDEGENI
ELIGPFEQVFMEIRCPDGRDGGRKDAFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMY
QCQMAKQTMAFSLQALCNRADQKLYHLKTPQSPIVRTSAYKKYCIDEYPTGTNAIVAVLS
YTGYDMEDAMILNKSSVDRGMFHGLIYQTETIDLSDQKSRSDRSRKFFRRSNINKNSSID
SDGLPYVGQTIKPNEELYSIHNEVTNESRSIKHKGSEPVIVDYVAIDGKKLLQKASIRFR
HPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLE
SVAAKGGSLHGKYVDATPFANSKNVNEETPPQSKTLVDELGEMLKVKGFNYHGTEVMYSG
VYGTELTCEIFMGPVYYQRLRHMVSDKYQVRSTGTIDQITHQPIKGRKRGGGIRFGEMER
DSMLAHGAAYLLHDRLHTCSDYHIADVCSICGSILTTSFVKPERRVGRAVKGLPPIRASK
KVICHACQTSRGMETVAMPYVFKYLAAELAAMNIKLTLQLNNAA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgaagagagaagagaagatgaagaagatgtttgggaagccatcggctgagtcg
gaggactacgcggcggtgcgtgagctcttcaggcaccacatagagtcattcgatcacttt
gtcactgctggtcttgagactatgctcaataaaatcaagcccatcgaagtcgtcgactct
tccaccggaacaagccttgcaatttggtttggcaaaccttttttattcccacctcaaaag
gaagaatcaaaaactgcccgtggaaagctgcttccttttgaatgtagacaggctaaactt
tcgtacacagggaaattcatggcagatgtttactttaagtataatgacggacccgcaata
agagagaatttcaattttgggcagcttcccatcatgctaatgtcaaagctttgccactta
agaggtgctaatcccgaaaagctagtttcttgcaaagaagagtcatcagaaatgggtggt
tacttcgtgttaaatgggctcgagagagttgttcggcttgtcatattgccaaagcggaat
tatccaacgagtatggtgcgaaattcatttcgtgatcgaaaggaaggatatactgataag
gcagttgtaataaggtgtgcaagagaagatcaatcttcagtaacagtcaaattgtactac
cttcgtaatgatagcgcaagacttggattttggatacaagggagggaatacttgcttcct
gtgggtcttgtcttaaaggctcttattgacactactgatcacgaaatttataaaaatttg
acatgttgctatgtcgagaaagatgagagttgcgatgtcaagaaatatgagaaaggaaag
ggtaatgttggcactcagcttgtgggtgagcgggcacacattattctagatgaagtgaga
gactttatcactcgccgtcaatgtctagagcacattggagggcacttccgacctcttatg
cgtggactggaggatgaaagtgatctttctgtggttggagaagctgttctagaggactac
atatttgttcaccttgataaagggtttgacaaattcaatctgctcatatttatggtgcag
aagcttttttctcttatggatcagacatccttgccagacaatccagatgccttgcaaaat
catgaagtcttactccccggtcacttgattaccatatatctcaaggaaaaactagaagat
tggttgcaaagggccaaaaaacttcttcaagatcagatcaacaacaaaagcaagactttt
gatttttgcagcttagtaaatgtaaagaaggttttggataaaaatccttcaaagcacatc
agtttagctgttgaaaatatgttgaaaaccggaaggcttgttacgcaatcaggtctagat
ttgcagcagagggcaggcttaacggttcaggcagagaggcttaattatctgcgttactta
tctcattttcgtgccgtccatcgaggagcttcatttgctggacttcgcaccacaagcgtg
cggaaattgctacctgaatcttggggttttctttgcccggtgcatacacctgatggagag
ccgtgtggcttgttgaaccatatgacttccacttgtagaattacatcctactttgatgca
caaggaaatattagaaacttcttgaatatccgagagtctattctcactgttctgagtgag
cttcaaatgatatcttcagtgccaaagctggttcaagctggtcctcctgcaaatctttct
gttcttttagatggctgtgttgttggttctatatcttccaaagtagttgagaaagttgtg
gctcagttaaggaggctgaaagtgtcagcttcttcagtgattcctgatgatctggaagtg
ggatatgtaccattgagctcgcgtggggcatatcctggtctgtaccttttcacttctcct
tctagatttgttcggccagttaagaatatttcaattccttctgatgaaggtgaaaatatt
gaacttattgggccctttgaacaggttttcatggaaataagatgtcctgacggtcgagat
ggtggaaggaaagatgctttccctgcaactcatgaagaaattcatccaacaggaatgctc
agtgtcgtcgctagtcttacaccctggtcagatcataatcagagcccacgaaatatgtac
cagtgtcagatggcaaaacaaacaatggccttctctttacaagcactttgcaaccgtgca
gatcaaaagctgtatcatcttaagactcctcagtctcccattgtacgaacaagtgcatat
aagaagtactgcattgatgaatatccaacaggcacaaatgcaatcgttgctgtactgtca
tatactgggtatgatatggaggatgccatgattttaaacaagtcatctgtggatcgtgga
atgtttcatggactaatttatcagacagaaacaattgacttgtctgatcaaaagagcagg
tcagatagatcacggaaattttttaggagaagtaacatcaataagaattcctcaatcgat
tcagatggtcttccttatgttggtcagacaataaaacccaatgaagaattgtatagcatt
cataatgaggtgacaaatgagtcaagatccatcaaacacaaaggttcagaacctgttatc
gttgactatgttgctattgatgggaagaagcttcttcagaaggcgagcatacgctttcga
caccctagaaaccctatcattggtgataaatttagcagccgacatggacaaaagggtgtt
tgctcccagttgtggcctgatattgatatgccattttctggggttacaggaatgcgtcca
gatcttatcatcaatccacatgcattcccctcaagaatgacaatagcgatgctcttggaa
tcagtcgctgcaaagggaggtagcttacatggaaaatatgttgatgcaacaccatttgct
aattcaaagaatgttaatgaagagactccaccacaatcgaaaacacttgttgatgaactt
ggtgaaatgttaaaggttaaagggtttaactaccatggtacagaggtaatgtacagcggg
gtctatgggacagaactcacatgtgagatctttatgggtcctgtttattatcaacgccta
cgacatatggtttcagacaaatatcaggttcgttccactggaacgatagaccagatcacc
caccagcctatcaagggacgaaaaagaggtggtggtatacgttttggtgaaatggagcga
gactctatgcttgcacatggggcagcatatctgttgcacgacaggcttcatacgtgttcc
gattatcacattgctgatgtatgttctatatgtggaagcatcctaacgacctcattcgtc
aagccagaaagacgggttggacgtgcggttaagggactgccgcccataagagcctcaaag
aaggtcatttgccatgcttgtcagacgagtagagggatggagacagttgcaatgccttat
gtcttcaaatatttagcagctgagttagcagctatgaacataaaattgacccttcagcta
aataatgcagcgtga
DBGET
integrated database retrieval system
