Prunus dulcis (almond): 117615874
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Entry
117615874 CDS
T07328
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdul03016
]
117615874
Enzymes [BR:
pdul01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
117615874
Transfer RNA biogenesis [BR:
pdul03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
117615874
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
117615874
NCBI-ProteinID:
XP_034200931
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Position
1:41475060..41483342
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AA seq
635 aa
AA seq
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MEDIEDLLVGSGGGAPPGFRLPITAVGLNPKKNKNKNKPNPSGNSNKLSQIQDPLAPLSP
KIPGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYPLSDNPEEADLWLINTCTVKSPSQSA
MDTLIAKGKGAKKPLVVAGCVPQGSRDIKELEGVSIVGVQQIDRVVEIVEETLKGHEVRL
LSRKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDGLVGRVKSV
IADGVKEIWLSSEDTGAYGRDIGANLPILLNAIVAELPSDASTMLRIGMTNPPFILEHLK
EIAEVLRHPCVYSFLHVPVQSGSDAVLTAMNREYTVSEFKTVVDILTELVPGMQIATDII
CGFPGETDEDFTQTLSLIKLYKFPQVHISQFYPRPGTPAARMKKVPSTVVKRRSRDLTSV
FEAFTPYVGMEGWVERIWITEVATDGIHLVGHTKGYVQVLVAAPESMLGTSAIVKITSVG
RWSVFGEVIETIPHINDTVSGNERPKQEKNFSGLNHYETSACSTKSENCCCGPESCGGQS
EKSAVMKNDVQLEDRNSRNLIGWLLRKRKNHVEKHVEKPVENEIGLGSQKKQEQTQGSLG
EWGVVDRALLGGMLVSFLTIVTLLLHLGFRILSSN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatagaggatttgctagttgggagcggaggtggagctcctccgggttttcgt
ttgcccataacagccgtcggattgaacccaaagaagaacaagaacaagaacaaacccaat
cccagtggaaatagcaataagctatctcaaatccaagacccccttgctcctctctctccc
aaaatccctggaactcagactatatatatcaagacatttgggtgctcacacaaccagagt
gacagtgaatatatggctggccaactttcagctttcggttatccattaagtgacaatcct
gaggaggcagacctgtggctcataaatacatgcacagtcaaatctccaagtcaatctgcc
atggatactctgatagcaaaaggtaaaggtgcaaaaaagcccctggtggtggctgggtgt
gtgccacaaggaagtcgagatataaaggagctagaaggtgtcagcattgtaggagtccag
caaattgaccgtgtggttgaaattgttgaagagactttgaaaggtcatgaggtgcgcctt
ttgagccgtaagacattgccagcgcttgacctccctaaggtaaggaaaaacaagttcgtt
gagattctccctattaacgttggctgtttaggtgcttgcacttactgcaagactaagcat
gctcgtggtcatttagggagttatactgttgatggccttgtgggacgtgtaaaatctgtg
atagctgacggagtcaaagaaatatggttgagcagtgaagatactggagcttatggtcgt
gatattggtgccaatctaccaattttattgaatgcaattgttgcagaactcccttcggat
gcaagcacaatgcttcgaattgggatgacaaatcctcctttcattctggagcacttgaaa
gaaatagcagaagttttgcgacatccatgtgtatactcatttctacatgtaccagtccaa
tctggaagtgatgctgtcttaactgcaatgaatcgggaatatactgtaagcgagttcaag
actgtggtagatatcctaactgagcttgtgccagggatgcagattgcaactgatataata
tgtggatttcctggtgaaacggatgaagattttactcaaactcttagccttattaagctg
tacaagttccctcaagttcatatttcacagttctatcctcgaccaggaacacctgctgca
aggatgaaaaaggtccccagtactgtagtgaagagaaggagtcgtgatttgacttctgtt
tttgaagctttcacaccgtatgttgggatggagggctgggtggaaagaatatggataact
gaagttgccactgatggaattcacttggttggccataccaagggatatgtgcaggtgctt
gtagctgctccagaaagtatgttggggacttcagctattgtgaagatcacatctgttgga
aggtggtcagttttcggagaagtgattgagactattcctcatataaatgatacagtttca
ggaaatgaaaggcctaagcaggaaaaaaatttctctggtttgaaccattatgagactagt
gcatgttcaacaaagtcggaaaattgttgttgtggaccagaaagctgtggaggacagtcg
gaaaagtctgctgtaatgaagaatgacgttcagctggaagataggaacagcagaaatctg
attggatggctactgaggaagcgaaaaaaccatgttgaaaaacatgttgagaaacctgtg
gagaatgaaataggcttgggatcccagaaaaagcaagagcagacccaaggaagcttgggt
gaatggggtgtcgttgatagggctcttctaggcgggatgcttgtgagcttcctgacaatt
gtaactctactattacatcttggatttaggattctgtcatctaattag
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