KEGG   Prunus dulcis (almond): 117619830
Entry
117619830         CDS       T07328                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5C
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03020  RNA polymerase
pdul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117619830
  09124 Replication and repair
   03420 Nucleotide excision repair
    117619830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdul03021]
    117619830
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117619830
Transcription machinery [BR:pdul03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117619830
  RNA polymerase III system
   RNA polymerase III
     117619830
  RNA polymerase I system
   RNA polymerase I
     117619830
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117619830
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 117619830
NCBI-ProteinID: XP_034205764
LinkDB
Position
2:complement(3038188..3041785)
AA seq 230 aa
MATGNENDVVLGCDGGRRPGCITSHVVEGSMESYRFYLSRRTAMEMLSDRGCDVSDSDLS
LSLTEFHSQFGPNPDLQQLRICVSLRSNPSKKIVVIFCGTEEIRKQTMCGIYAGLPNKEN
IHRLILVLQSKMNSYARKELEMYPFKVETFHICDLLVNITKHALKPKLEILTAEEKNNLL
RKYKLEDKQLPLMLETDGIARYYGLEKGKVVKVTYSGGVVGSLRTFRCVV
NT seq 693 nt   +upstreamnt  +downstreamnt
atggctaccggcaacgagaacgacgtcgttttgggttgcgatggaggacgacgacccgga
tgtataacgagccatgtggtggaggggagcatggagagctacagattctacttgtctcgt
cgtacggccatggagatgctgagtgaccgaggctgcgacgtctctgactcggacctctct
ctctcactcactgagttccactcccagttcggccccaacccggacctccagcagctccgt
atctgcgtctctctgcgctccaatccctccaagaagattgttgtcatcttttgtggaact
gaggaaataaggaaacagactatgtgtggcatctatgctggcctcccgaacaaagaaaat
atacaccggctgattcttgtcctgcaaagtaaaatgaactcctatgctcggaaagaactg
gagatgtatccatttaaagttgagactttccatatttgtgacttgctggtcaatattaca
aagcatgctctgaagccaaagctcgagatactcactgccgaagaaaagaacaacctgcta
aggaagtacaagttggaagacaagcagctccctctaatgctggaaactgatggaattgct
cgatattatggattggagaaagggaaggttgtaaaagttacttacagtggtggagttgtt
ggttccctcagaactttccgctgcgtggtctga

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