Prunus dulcis (almond): 117620288
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Entry
117620288 CDS
T07328
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117620288
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdul02000
]
117620288
04147 Exosome [BR:
pdul04147
]
117620288
04090 CD molecules [BR:
pdul04090
]
117620288
Enzymes [BR:
pdul01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117620288
Transporters [BR:
pdul02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117620288
Exosome [BR:
pdul04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117620288
CD molecules [BR:
pdul04090
]
Proteins
117620288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_29
RsgA_GTPase
AAA_21
AAA_5
AAA_15
Zeta_toxin
DUF87
DEAD
nSTAND1
DUF815
AAA_7
CPT
Motif
Other DBs
NCBI-GeneID:
117620288
NCBI-ProteinID:
XP_034206343
LinkDB
All DBs
Position
2:17228522..17232981
Genome browser
AA seq
1080 aa
AA seq
DB search
MLSSIPLVVLSGAVMSILISKMASSGQTAYSVAATVVEQTIGSIRTVASFTGXKQAIANY
NNSLIKAYNSGVQEGLASGFGIGSVMLIIMCSYALAIWFGGKMILEKGYTGGEVINVVFA
VLTGSMSLGQASPCLSAFSAGQAAAYKMFETIDRKPEIDASDTNGQQLHDIRGDIELRDV
YFSYPARPDEQIFDGFSLSIPSGATAALVGESGSGKSTVVSLIERFYDPLAGEVLIDGIN
LKEFQLKWIRQKIGLVSQEPVLFTCSIKDNIAYGKDGATTEEIRAAAELANAAKFIDKLP
QGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESESIVQEALDRIM
INRTTVVVAHRLSTVRNADTIAVIHRGTIVEKGPHSELIKDPEGAYSQLIRLQEMSSVSE
QTAVNNHERLGSVDSRRHSSQRFSNLRSISGGSSGSGNSNRHSFAITYGVPTAVDSLETA
SVGRDIPASASSRGPTEVSLRRLAYLNKPEIPVLLLGTIAAAVNGAILPIFSILISSVIK
TFYEPPPQLRKDSKFWALIFIVLGVVAFIAVPARQYFFAVAGCNLIKRVRSMCYEKVVYM
EVSWFDDPEHSSGAIGARLSTDAASLRGMVGDALGLLVENSATAIAGLCIAFVANWQLAL
IILVLLPLLGLTGYVQVKFLKGFSADAKKMYEDASQVANDAVGSIRTIASFCAEEKVIEL
YQKKCEGPIKTGIRRGLISGTGFGLSFFFLFSVYACSFYAGARLVAAGKTTFSDVFRVFF
ALAMTAIGVSQSGSLAPNLGKVKSSAASIFAILDRKSKIDSSDESGTTIENVKGEIELRH
VSFKYPTRPDVPIFQDLCLTIHHGKTVALVGESGSGKSTVVSLLQRFYDPDSGHITLDGF
EIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKEGNATEAEIIAAAELANAHKFISS
LQQGYDTIVGERGIQLSGGQKQRVAIARAVIKAPKILLLDEATSALDAESEQVVQDALDR
IMVDRTTIVVAHRLSTIKGADVIAVVKNGVIAEKGKHETLIGIKDGIYASLVALHASASS
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgctatcttctatcccccttgttgtcctctctggtgccgtcatgagcatccttatatca
aagatggcatccagtggacaaactgcttattcagtggcagcaactgtggtagagcagaca
attggttcaatcagaacagttgcatcgtttacaggataaaagcaagctatagctaattac
aacaactccttaattaaagcttacaactctggtgtgcaagagggtttggcatctgggttc
ggaattggttcggttatgctgattataatgtgtagttatgctctggctatatggtttgga
ggaaagatgatacttgaaaaaggatatacaggaggggaagtcatcaatgtagttttcgct
gtgttgactggctccatgtctcttgggcaggcatctccatgcttgagtgcattttctgct
ggacaagctgcagcttataagatgtttgagacaattgacagaaagccagagattgatgct
tctgacactaatgggcaacaattacatgatatccgtggagacatagaactgagggatgtt
tattttagttatcctgcaagaccggatgaacaaatattcgatggattttctctttcaata
cctagtggtgcaactgctgctttggttggagagagtggaagtggtaaatcaactgtagtc
agtttgattgagagattttatgaccccctagctggcgaagttcttattgatgggattaat
ctcaaagagttccagttgaaatggatcagacagaaaataggccttgtcagccaggaaccc
gttttatttacttgtagcattaaagataatattgcctatggaaaggatggtgcaaccact
gaagaaataagggctgctgctgaacttgccaatgctgctaaattcatagacaaactgcct
cagggactagacacaatggttggtgagcatggaactcagctatctgggggccaaaaacag
agagttgcaatagctagagcaattctcaaagacccaagaattctacttttagatgaagcc
acgagtgctcttgatgcagaatctgagagcattgtgcaggaggcactggacagaattatg
atcaaccggactactgttgtcgtagcccaccgcttgagcacagtaaggaatgctgacacc
attgctgttatacatcgaggaacaattgttgaaaaaggtccacattctgagctaattaag
gaccctgaaggagcatatagccagcttataaggttgcaagaaatgagcagcgtgtcagaa
cagactgctgtaaataatcacgaaaggcttggcagcgtggattctcgaagacattcaagt
caaagattttcaaacttacgatccataagcgggggatcatctggaagcggaaatagtaac
cgtcattccttcgcaatcacatatggtgtgcccactgcagtcgattctcttgaaacagca
tctgtaggacgtgatattcctgcttcagcatcatcaagagggcctacagaagtctcactt
cgtcgcctggcttacctgaacaagccagagatcccagtattattactgggtactatagcc
gcagcagtcaatggggcaatcttacctattttttcgatattgatatccagtgtaatcaag
accttctacgagccacctcctcaactccgtaaggattcgaagttttgggcattaatcttc
attgttcttggagtggtagctttcatagcagtgccagcaagacaatacttttttgctgtg
gcagggtgtaatttaataaaacgagttcgatcaatgtgctatgagaaggtggtttacatg
gaagtaagttggtttgacgatcctgagcactcaagtggtgcaattggtgcaaggctttct
acagatgcagcttctctgcgtgggatggttggagatgcactaggtttgctggttgagaat
tcagcaactgcaattgctggtttgtgtattgcttttgtggcaaattggcaacttgctctt
ataatcctggttttgctgcctctattaggattaactggttatgttcaagtcaagttcttg
aaaggattcagtgcagatgcaaagaaaatgtatgaggacgcaagtcaagtagccaatgat
gcagtggggagtattcgaacaattgcttccttttgtgctgaagagaaggtgattgaattg
taccagaagaaatgtgaaggccctattaagacagggataagacgagggttaatcagtggg
acaggttttgggctctcgttcttttttcttttttctgtgtatgcctgcagtttttatgct
ggagcccgacttgttgcagcaggcaagacaacattctctgatgttttccgggttttcttt
gctctagcgatgacagctattggagtgtctcagtcaggttccctagcccctaatcttggt
aaagtaaagagctctgctgcttccatatttgccattcttgaccggaaatcaaaaatagac
tctagtgatgaatctggaacaactatagaaaatgtgaagggagaaattgaacttcgccac
gtcagtttcaagtatccaactagacctgatgtaccaatcttccaggatctttgcttgacc
attcatcatggcaagacagttgctttggttggagaaagtggaagtgggaaatcgacagtc
gtctcattgttgcagagattttatgaccctgattcaggtcacattacattagatggattt
gaaatccaaaagctacagctcaagtggttgagacagcaaatgggactggtgagccaggag
cctgtattgtttaatgacactatcagagccaacattgcatatggaaaggaagggaatgca
acagaggctgaaattatagctgctgcagaattggcaaatgctcacaagttcatcagtagt
ttacaacagggttatgatacaatagtaggagagcgggggatccaattgtctggtggacag
aagcaaagggtggcaattgcacgagctgtaattaaggcaccaaagatactactactagat
gaagccacaagtgctcttgatgctgaatcggaacaagtggttcaagatgcattggaccga
atcatggtggatcgaaccacaatcgtggttgcccatcggttatccacaataaagggtgcg
gatgtaattgcagtggtgaaaaatggagtcattgcagagaaaggaaagcatgaaactttg
atcggtatcaaggatggtatttatgcttctttggtagcattgcatgcaagtgcctcatct
tag
DBGET
integrated database retrieval system
