Prunus dulcis (almond): 117625709
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Entry
117625709 CDS
T07328
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117625709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117625709
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117625709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
TMF_TATA_bd
BRE1
Motif
Other DBs
NCBI-GeneID:
117625709
NCBI-ProteinID:
XP_034213133
LinkDB
All DBs
Position
4:complement(7317208..7338988)
Genome browser
AA seq
2073 aa
AA seq
DB search
MPLFVSDEDFSRHGNDATWVADKADAFIRDLQTELETFRAQNDAASITAEQTCSLLEQKY
LSLSDEFSKLELQYAQLQSSLDHRLSEVAELQSQKHQLHLQSIEKDGEIERFKTEVSELH
KSKRQLIELMERKDLEISEKNATVKSYMDRIVYSSDNAAQREARLSEAEAELARTKASCT
RLSQEKELIERHNVWLNDELTEKVDSLIGLRKTHADVEADLSSKLADVERQFNECSSSLK
WNKERVRELEAKLRSLQEELCSSKDAAAANEERLNAELSTLNKLVELYKESSEEWSKKAG
ELEGVIKALETHLSQVENDYKERLEREESARNQFQKEAADLKAKLEKCEAEIETSRKANE
LNLLPLSSFTTEAWMNSFESTDMVEVNRAVVPKIPAGVSGTALAASLLRDGWSLAKMYAK
YQEAVDAFRHEQLGRKESEAILQRVLYELEEKAEVILDERVEHERMVEAYSMINQKLQNS
ISEQANLEKTIQELKAEIRRHERDYTFARKEISDLQREVTILLKECRDIQLRGASSGHDS
HDYGTVAVVEMNAESDAEIVISEHLLTFKDINGLVEQNAQLRSLVRNLSDQLENREMEVK
EKFEMELKKHTDEAASRVAAVLQRAEEQGHMIESLHSSVAMYKRLYEEEHKLHSSSPRLA
EAAPEERRADVKLLRESSQEATRKAQDQAVEQVKCLEEDLARTRSEIISLRSERDKLALE
ANFARERLESFMKEFEHQRKETNGVLARNVEFSQLIVDYQRKLRESSEFVQTAEERSRKF
TMEVSVLKHEKEMLEHAEKRACDEVRSLSERVYRLQASLDTIQSAEQIREEARAAERRRQ
EEYTKQIEREWADVKKDLQEERNNARTLTLDREQTIQNAMRQVEEIGKELSNALHAVASA
ESRAAVAEAKLTDLEKKIRSSDIKVVDIDGESGSSSLTSDEAVVALRAAKEEIEKLKEEV
KANKDHMLQYKSIAQVNEDALRQMEFAHENFKIEAEKLKKLLEAELLSLRERVSELEHES
GLKSQEVASAAAGKEEALSSALSEITSLKEEISAKISLNASLETQISALKEDLEKEHQRW
HSAQANYERQVILQSETIQELTKTSQALAVLQEEAAELRKLVDALKSENNELKSKWEFEK
AMLEESKDVAEKKYNEINEQNKILHSQLEALHIQLAERDRGSFGTSASTGSDTSGDAGLQ
NVISYLRRTKEIAETEISLLKQEKLRLQSQLESALKASETAQSSLHAERANSRSLLFTEE
EIKSLQLQVREMNLLRESNIQLREENKHNFEECQKLREISQKANIETQNLERLLRERQIE
LEACRKELEVLKTEKDHLEKKVHELLERYRNIDVEDYDRVKNDVRQLEEKLEKKVSRVEE
VEKLLSEKQETVSHLEQDLSNYRLDLTEKEKRINETLQVEASLRSDGEKQKKAILQYKKR
CETLLKEKEELSKENQALSRQLEEVKQGKRSSGDTSGEQAMKEEKDKKIQTLEKLMERHR
DDMRKEKEENRMEKAKRIRTEKAVKDSYTNVEQDKTKFMNELEKHKQAVRQLSDELEKLK
HAKDSLPEGTSVVQLLSGSILDGLAAAYSSAVENFEKAAHSVHSDFGIHGVPADTPPVSD
ASLAATSGTGQAPTVVSSMSPATGLASKSTEESEKRLTLTLPKSNVETRKTGRKLVRPRL
VRPEEPQGDVEMSEMEGSRNVAKHAPSNEMEVQGNVTSTQPLLRKRHASSSAFESREESS
NQGETGPDVAAPVPKKSKGSDSPQGSEGQPSAISENLCSVPVKDEAIDVAELPQGSSEEA
VGDTEKEEIETTGEKVEEPNERQFDGSNQVESQPNKHIGLEENVDGSGGTEMMCDDGAKD
QVELDNQQTNEFGGDREEGELVPDVSELEGGDTIGSPEIGEGQPEPVATPGASPARGDDE
GVAASSVVDIGEVNSPEVLNDDKNDEVVTEEAADGSDKSNDGNEQTGMETDQAASAASVI
IENTSSTPTEVNVTTQVSPSVTAETEEVKQVSPMTNTSTTIFISERARQRSVIRQAGAGA
PSPPIRGRGRPAGRGRGVRGRGRARGAAPGDQG
NT seq
6222 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcttcgtctccgacgaggacttctcccgccacggaaatgacgccacttgggtg
gcggacaaggccgacgcgttcatccgcgacttacagacggagctagagacgttcagggcc
cagaacgacgccgcttccatcacggccgagcagacctgctccctcctcgagcagaagtac
ctatcactctccgatgaattctccaagctcgagttgcaatacgcgcagcttcagtcctcc
ctcgaccaccgcctctccgaggtcgccgaactccaatcccaaaagcaccagctccatctc
caatcgattgagaaggatggggagatcgagaggtttaagacggaggtgtcggagctgcac
aaatcaaaaaggcagttgatagagttgatggagcggaaggatttggagattagtgaaaag
aatgccaccgtcaagtcttatatggacaggattgtttattcgtcagacaatgctgcacaa
agggaggcccgtttaagtgaagctgaggcagaattagcacgcaccaaggcttcatgtact
cgtctatcacaggagaaagaacttattgagaggcataatgtctggcttaatgatgagtta
acagagaaagttgacagtctcattgggctacgtaaaacacatgccgatgttgaggcagat
ttgtcttctaaacttgcagatgttgagagacaattcaatgaatgctctagctctttaaaa
tggaacaaggaaagagtgagggaactagaagcaaagctaagatctctacaggaggaacta
tgctcatctaaagatgctgctgcagccaatgaagagcggttaaacgctgaactttcaaca
ttaaataagcttgttgaactatataaagaaagttctgaggaatggtccaagaaggcagga
gagctcgagggtgtgatcaaggctctggagacacatttgagtcaagtggaaaatgattac
aaagagagacttgagagggaagaatcagcaagaaatcaatttcagaaggaagctgcagat
ctgaaagcaaaacttgagaagtgtgaagcagaaatcgaaacgagcaggaaagcgaatgag
ctaaatcttcttccacttagtagttttaccacggaagcatggatgaattcatttgaatct
actgacatggttgaggttaatcgtgcggttgtcccaaagattcctgctggtgtttcagga
acagcattagcagcctcacttctacgggatggttggagtcttgcaaaaatgtatgcgaag
taccaagaggctgttgatgcctttcgtcatgagcagttgggaaggaaggaatctgaggca
attttgcaacgggttctatatgaattagaggagaaagcagaagtcattttggatgaaaga
gtggaacatgagagaatggttgaggcatattctatgatcaaccaaaaactgcagaattca
atttctgaacaggcaaacttagagaaaaccatccaggagttaaaggccgagataaggagg
catgagcgtgactacacatttgcccgaaaagagatctctgatctccagagagaggtgaca
atccttctgaaagaatgtcgagatatacagcttcgtggcgcatcttctggtcatgatagt
catgactacggtactgttgctgtggttgagatgaatgctgaatctgatgctgaaatagtc
atatctgaacatcttttgaccttcaaggacataaatggactagttgagcagaatgcccag
ctcaggagtcttgttcgcaatctttctgaccagcttgaaaatagggaaatggaggtcaag
gaaaagtttgaaatggagctcaagaaacatactgatgaagctgcctctagagttgcggca
gtgttacaaagagctgaagagcaagggcacatgattgaatcccttcactcctccgttgca
atgtacaaaaggttatatgaagaggagcataaacttcattcatctagtccccgcttagca
gaggcagctccagaagaaagaagagctgacgttaagcttctccgtgagagttcccaggaa
gctaccagaaaggcccaagaccaggctgtagaacaagtgaaatgtctggaggaagatttg
gcaaggaccaggagtgagatcatatcattgcggtcagagcgtgacaagttggctttggaa
gcaaattttgctcgagaaagacttgagagcttcatgaaagaatttgagcatcagagaaaa
gaaacaaatggtgttttagcaaggaacgttgagttctctcagttaatagttgactaccaa
cggaagctgcgagaaagttctgaatttgtgcaaactgctgaggagcgttctaggaagttc
actatggaggtatctgttttgaagcatgaaaaagagatgttggaacatgctgagaagaga
gcttgtgatgaagttcgtagtttgtcagagagggtctatagacttcaggctagtttagac
actattcaaagtgctgagcaaattcgtgaggaggcaagagctgctgagaggagaagacaa
gaagagtatacaaaacaaatagagagggagtgggcagatgtcaagaaagatctacaagaa
gagcgcaacaatgcccgcactctcacccttgaccgtgagcagaccatacaaaatgccatg
agacaagtcgaagaaataggaaaggagttgtctaatgcattgcatgctgttgcttcagct
gagagtagagctgctgtagccgaggctaaactgactgatctggagaaaaagataagatcc
tccgatattaaggttgtggatattgatggtgaaagtggatcttcctctttgacgagtgat
gaggctgtggtggcattgcgtgctgcaaaggaagagatcgaaaaattgaaagaggaagtg
aaagctaataaggatcacatgctacagtataagagcatagctcaggtaaatgaagatgca
ttgagacagatggaatttgcccatgaaaacttcaagattgaggctgaaaaactgaagaaa
ttgcttgaagctgaacttctttctttgagagagagggtctctgaacttgaacatgagtct
ggtttgaagtctcaagaagttgcttcagcagctgcagggaaggaagaagccctttcttct
gctttatctgaaattacaagtctaaaggaagaaatctcagctaaaatttccctaaatgcg
tcactggagactcagatatcggctttgaaagaagacttggagaaagaacatcagcgatgg
cattctgctcaggctaactatgaaagacaggttatcctccagtcggagacaatacaggag
ttgactaaaacatcgcaagctttggctgtgctccaggaagaagctgcagagttgcgtaaa
ttggttgatgcacttaaaagtgaaaataatgaactgaagtctaagtgggaatttgagaag
gcaatgttagaagaatcaaaggatgttgccgagaagaagtacaatgaaatcaacgaacag
aacaaaatactgcacagtcagcttgaggctttgcacattcaactggctgagagagatcgt
ggatcatttggaacttcagcaagcactggttcagatacttctggggatgctggtttacaa
aatgtaataagttatcttcgacggacaaaagaaattgcagagacagagatttctttgttg
aaacaagaaaaacttcggttacaatcacaacttgagagtgccctcaaagcttcagaaaca
gcccaatcatcacttcatgctgagcgtgcaaattcaagatcattgttgttcactgaggag
gaaataaaatccttacagctacaggttagagaaatgaacttacttcgggaaagcaatatc
cagctaagagaagaaaacaagcacaattttgaggaatgccagaaattgcgtgaaatatca
caaaaggctaatattgagactcagaacctagagagattgttaagggagagacagattgag
ttggaagcctgtagaaaagaacttgaagtgctaaagactgagaaagatcacttggaaaaa
aaggttcatgagttacttgaaaggtataggaatattgatgtggaagattatgatcgtgtg
aagaatgatgttcgtcagttggaggaaaaattggagaagaaggtttctcgtgtagaagaa
gtcgagaaacttctttcagaaaagcaggagactgtatcacatctggagcaagatctttct
aactacagattggatctgactgagaaagaaaaaaggataaatgaaactttgcaagttgag
gcaagtctaagatcagatggcgagaagcaaaagaaggcgatccttcagtataagaagagg
tgcgagacactcttaaaggaaaaggaggaactgagcaaggagaatcaagctctttctagg
cagttggaggaagtcaaacaagggaaacgatcttctggggatactagcggagaacaggcc
atgaaggaagagaaagacaaaaaaattcagactctggaaaagcttatggagaggcataga
gatgatatgcgaaaggagaaggaagaaaaccggatggagaaagcaaagcgcataaggact
gagaaggcagtaaaggattcctacactaatgttgagcaggataaaacaaagttcatgaat
gaactggagaagcataagcaggctgtaaggcagctttcagatgaacttgaaaagctgaag
catgcaaaagacagtctccctgagggtacctctgttgttcaacttctttctggatccata
ctggatggccttgccgctgcctacagctcggctgttgaaaattttgaaaaggcagcacat
tcagttcacagtgactttggaattcatggtgttcctgcagacactcctccagtttcagat
gcttcattagcagctacttcgggtactggtcaagcaccaactgtagtgtcctcaatgagt
cctgcaacaggtttggcatccaaatcaactgaagaaagtgaaaagagattgaccttgact
ttgcccaaaagcaatgttgaaacgcgtaaaacagggaggaagttggttcggccccgtctt
gtaagacctgaagaaccacaaggtgatgtagagatgtcagagatggaagggagccgcaat
gtggccaagcatgccccatcaaatgaaatggaagttcaaggcaatgttacttcaacacaa
ccgctgcttcgaaaacgtcatgcttcttcatctgcttttgagtctcgtgaggaatcaagt
aaccaaggggaaactggtcctgatgtggcagcacctgtgccgaagaagtccaaaggttca
gattctccacaagggagtgaaggccaaccatctgctatttctgaaaatctttgcagtgtt
ccagtcaaagatgaagctattgatgtcgctgagttgcctcaaggttcaagtgaggaagct
gttggtgatactgagaaggaagaaattgagactacgggagagaaggttgaagagccaaat
gaacgacagtttgatggttcaaatcaagtagaatcacaacccaacaagcatattggttta
gaagaaaatgttgatggatcaggtggaactgagatgatgtgtgatgatggagccaaggat
caggttgagctggacaaccaacagaccaatgaatttggaggagacagagaagagggagag
ttggtccctgatgtttctgagcttgaagggggtgacacaattggcagtcccgaaataggg
gaaggtcaacctgagcctgttgcaactccgggggcttccccagccaggggcgatgatgaa
ggggttgctgctagttctgttgtggatattggtgaggtaaattctccagaggttctaaat
gatgataaaaatgatgaagttgtaactgaagaagctgccgatggttctgataaatcaaat
gatggtaatgaacaaactgggatggagactgatcaggcagcttcggctgcctcagtaatt
atcgagaatacatcaagtactcctacggaagttaatgttacaacgcaagttagtccgagt
gttactgcagaaacagaagaggtgaaacaggtatctcctatgactaatacatcaactacc
attttcatatcagaacgagcgaggcagagatccgtgatcagacaggctggagctggggcc
ccttctccaccaataagaggccgtggaagaccagcaggacgtggacgaggtgtgcgtgga
cgtggacgtgcacgtggggcagcacctggtgatcaaggttaa
DBGET
integrated database retrieval system