Prunus dulcis (almond): 117629742
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Entry
117629742 CDS
T07328
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117629742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117629742
Enzymes [BR:
pdul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117629742
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
117629742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
117629742
NCBI-ProteinID:
XP_034218224
LinkDB
All DBs
Position
6:6201183..6221746
Genome browser
AA seq
1425 aa
AA seq
DB search
MRTMNRGQAKTLIFTKQPFIEDEGHRKIEKWQFSAMSDTEIVNMAETQIYKCNYYDPNQK
PIEGGLLDPRLGPANKSSGECATCGAVMKDCPGHFGFLVLALPVLNVGYLSTVVDILKCI
CKLCSGILLEEGMRNDFLKKMRSPKMEPLRKTELMKKIVKKCNNLTTNYRPVKCSKCGFI
NGSVKKAVGVLGIIHDRSKLNGVMDDFRTTLSHTKESKASFNVATHMLNPARIYSLFKRM
VDEDCELLNLSNRPQNLIIKNIAVPPIAIRPSVIVDRSLSNENDITERLKRIIQSNAILR
RDLLEAKSAPKCLASWDILQVEVAQYINSDIRGVPFSMQTAKPLSGFVQRLKGKGGRFRG
NLSGKRVEYTGRTVISPDPNLKITEVGVPIKMAQILTYPERVSHHNIEKLRQCVSNGPDK
YPGARMLRNPDGTEWSLKVNRKNAADGLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCH
RAKVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVMLMGVQNNLCTPKNGE
VLVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGTDPVDLPTPAVIKPIELWTGKQ
LFSVLVRPNSNVRVYLNFTVNEKSYSKTEDGGPEAMCPNDGFVYFRNSELIAGQLGKGTL
GNGNKDGLYSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPSDNLYNEKEK
IIKEGYNKCAGKIKLYNEGQLPLEPGCDAAQSLESGITKILNNIRDQTGKLCMQTLHWRN
SPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKAKTPAAKGFVA
SSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLSKILEDLSVQYDNTVRNASG
CIVQFCYGDDGMDPAMMEGEGGAPLDFRRLFLKAKATCPAGENESLSLEEVSEIVKDRLS
KQDMTPDRGCSAGFKSSLEEFLDKYAKELRKTHDTFVLDQSPAWKEKSASLEKIVQNISG
VTCKQLEVFLNICISRYHSKKVEAGTAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNVTL
GVPRIKEIINGAKKISTPIVTAILEHNNNAKFARVVAGRIEKTILGQVSKSIKIVMTSRS
ASIVITLDMVMIQDAHLSIDANVVKESILRTPRIKLKQEHVKVLDIRKLEILPQEADRSR
LHFNLYYLKSMLPKVIVRGISTVQRVVIDAKDVKKNKKDLEVTCADGDKREEKEYKLFAE
GTGLLAVMGTEGVDGCKTTSNNVMEVQQTLGIEAARVCIIEEIKHTMKSHGMNIDDRHMI
FLADVMTYRGEVLGITRFGVQKMDKSVLMMASFERTDDILFNACVNGRVDKVEGVSESII
MGIPMQIGTGIFKVRQRVSSDLRQPTYLGSNSDVELHYGPRPSLT
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgatgaatagaggccaagccaagaccctaatcttcaccaaacagcccttcatc
gaagacgaagggcatcgtaaaatagaaaaatggcaattcagcgccatgtccgacacggag
attgtcaatatggctgaaactcaaatttataaatgcaattattatgatcccaatcaaaag
cctatcgaaggcggcttattggacccccgcttgggccctgcaaataagagtagtggtgag
tgtgcgacatgtggtgcggtaatgaaggactgtccagggcactttggattcttggtgctt
gccctccctgttttgaatgttggatatttaagtactgttgtggacattttgaagtgcatt
tgcaagttatgttctggcatacttttggaggagggaatgcgcaacgactttttgaagaag
atgagaagtcccaagatggagcctttgaggaaaaccgagttgatgaaaaagatagtgaag
aagtgtaataacttgacaaccaattatagaccagtgaagtgctccaaatgtggatttata
aatggttcagtgaagaaggccgtgggtgtgctgggcattattcatgatcgttcaaaactt
aatggtgttatggatgactttcgaacaacactttctcacacgaaagagtccaaggcatcc
tttaatgtggcaactcatatgctaaaccctgctagaatttattctctgtttaaaaggatg
gttgatgaggactgcgagttgcttaatctttcgaatagaccgcagaacctcatcatcaaa
aacattgctgtgccacctatagctattcggccttctgttattgtggatagatcactgagc
aatgaaaatgacattacagagaggttaaagagaattattcaatccaatgctattcttaga
cgggatttattagaagcaaaatctgcacccaaatgtttggctagttgggatatacttcaa
gttgaggttgcacagtatataaatagtgacattcgtggtgttcccttttccatgcaaact
gccaagccattgagtggttttgtacagcgcctcaaagggaagggggggcgctttcgtggg
aatttatcagggaagcgtgttgaatatactggcagaactgttatatcacctgaccctaat
ttgaaaatcactgaggttggagtccctatcaaaatggctcaaatcttaacttatccagaa
cgtgtttcccatcataatattgagaagttgaggcagtgcgtcagtaatggacctgataag
taccctggtgccagaatgctcagaaatcctgatggcactgaatggtccttaaaggttaac
agaaagaacgctgctgacggactcaaatatggtgacatagttgaacgtcatctagaagat
ggggacattgttcttttcaacagacaaccaagcttgcatcggatgtctatcatgtgccat
agggctaaggttatgccttggagaacattgaggtttaatgaatctgtttgcaacccttac
aatgctgattttgatggtgatgaaatgaatatgcatgtcccacaaacagaggaggctcgg
acagaggctgttatgttgatgggggtgcaaaacaatctatgcactccgaaaaatggagag
gttttggttgcttccactcaagattttctaacatcctctttccttataacaaggaaggac
acattttatgaccgtgcatccttttcactcatgtgttcatatatgggggatggaacggat
cctgttgacttgccaacacctgctgtaattaagccaatagagctatggacggggaagcaa
ttatttagcgttctagtacgcccaaattcaaatgtgagagtctatctaaattttactgtt
aatgagaaatcatacagcaagactgaagatggaggacctgaagcaatgtgtccaaatgat
gggtttgtttattttcgtaacagtgagctcatagctggccaacttgggaagggtacctta
ggaaatggcaataaggatggactttactctgtacttctcagagactataaagctcatgcg
gctgcttcttgcatgaatcgcctagctaagttaagtgctcggtggattggtaatcatgga
ttctcaattgggattagcgatgtacaaccaagtgacaatttgtacaatgaaaaggaaaag
ataattaaggaaggttataacaaatgtgctggtaagataaagttgtataatgaaggacag
ctaccacttgaacccggttgtgatgcggcacaatcacttgagtctgggataactaaaata
ttaaacaatattagagatcaaactggaaagttgtgcatgcaaacactacattggagaaac
agtcctttgatcatgtcccagtgtggttctaaaggatctcctatcaatattagccagatg
attgcctgtgttggtcaacaatcggttggcggtcgtcgtgcacctaatggattcatagat
cgaagccttcctcacttccctagaaaagcaaaaacccctgcagctaaaggctttgttgct
agttccttttacagtggcttgacagctacagagttctttttccatactatgggcgggcga
gaggggcttgtcgatacagctgtgaaaacagctgatactgggtacatgtctcgtagattg
tcgaaaattttagaggacctatctgtccagtacgataacacagtacggaatgcaagtggc
tgcatagttcaattttgttatggggatgacggtatggatcctgcaatgatggaaggagaa
gggggagctcctttagattttcgtcgattgtttttgaaagctaaggccacgtgtcctgct
ggagaaaatgaaagcttgtcccttgaagaagtgtctgagatcgtgaaagaccggctttca
aaacaagatatgactcctgatcgtggttgctctgcaggtttcaaaagttctttagaggaa
ttcctggataaatatgcaaaagaattaagaaaaacacatgatacttttgtgttggatcaa
agtccggcttggaaggaaaagtctgctagtctggagaagattgtccaaaatatttctggt
gttacttgtaaacagctcgaggtttttctcaatatttgcatttctcgttatcattcaaaa
aaagtcgaagctggaacagcaattggagtaattggagctcaaagtattggtgaacctggg
acacagatgacactgaaaacttttcactttgctggggttgcaagcatgaacgttacactt
ggagtccctcgtatcaaggaaataataaacggagcaaaaaagatcagtacacccattgtc
actgcaatacttgagcataataataatgcgaaatttgcacgggtggtggcaggtcggatt
gagaaaacaattcttgggcaggtctctaagagtataaaaattgtaatgacttcaagatca
gcatccatagtcatcactcttgatatggtcatgattcaagatgcacacttgtctatagat
gctaatgtcgtaaaagaatcaattttacgaactccgagaatcaaactcaagcaagagcat
gttaaggttttggatatcagaaaattggaaattcttcctcaggaggctgatagaagtaga
ctccattttaacctctactatttaaagagtatgctcccaaaagttatagtaaggggtata
agcactgttcaacgtgttgtcattgatgcaaaagacgttaaaaagaataaaaaggatctt
gaagttacatgtgctgatggtgataaaagagaagagaaggagtacaagttgtttgcagaa
ggcacgggtcttctggcagtaatgggcactgaaggagttgatggttgtaaaaccacaagt
aataatgttatggaagtgcagcagacacttggaattgaagctgcgagagtttgtatcatt
gaggagataaagcatactatgaaatcgcatggaatgaacatagatgatcgccatatgata
tttttagcggatgtgatgacgtatcggggtgaagttcttggaatcacaagattcggtgtt
cagaagatggacaaaagtgttttgatgatggcttcatttgagcggacagatgatattcta
tttaatgcatgcgtaaatgggagagttgacaaggttgaaggagtaagtgaaagcataatc
atgggtataccaatgcagataggcactggaatatttaaagttagacaaagagtttcttct
gatttgaggcagcccacatatttgggatcaaattcagacgtggaactgcattatgggcca
cgcccaagtctaacttga
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integrated database retrieval system
