Prunus dulcis (almond): 117634254
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Entry
117634254 CDS
T07328
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117634254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117634254
Enzymes [BR:
pdul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117634254
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117634254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
117634254
NCBI-ProteinID:
XP_034224147
LinkDB
All DBs
Position
7:9273746..9292561
Genome browser
AA seq
1680 aa
AA seq
DB search
MAASEVPTTAVDAIRFGFFTDEEVRKHSFVKVTSPILFDDSTHTPVNGGLYDKAMGPLGD
ERGQLCQTCGQTAYTCSGHCGHIDLVLPAYNPLLFNILHKLLQRTCFFCYHFRTSRQHVE
KHVSQLKLIMKGDVLGAKRLESDSPSEYSDCNGSGNHIDNDSKQQGWTSLQFTEIMSVLD
KALPTHGKECKNCKAKNPKISKPTFGWFQMSGNDHARENVLRGCNLEGPLTGQDEEASML
EDENFNNVATRMQKGQGSKVLSEFFKQKTSLSGDLFPTEVKEIIRLLWENESQLCSFISD
IQCQETGTNGGHSMFFLETVLVPPIKFRPPSKGGDSVMEHPQTVLLSKVLEANVSLSQTL
TNLEHSRTIRRWRDLQESINVMFNSKTAAGQGQRDAAPGICQLLEKKEGLFRQKMMGKRV
NFACRSVISPDPYLAVNEIGIPPYFATRLTYPERVTPWNVDKLRNAIVNGSEIHPGATQY
VDKSGPKILRQNRRERISISRKLPSSKGAVMQHGKGSDNDIESKIVHRHLRDGDIVLVNR
QPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRSEAYNIV
NANNQYVKPTSGDPIRALIQDHVISAVLLTKKDTFLRWDQFNQLLYSSCVSARVSDAFSG
KPDKKVFMFNSEGTMQPLLPAIWKPEPLWTGKQVITALLNHITRGSPPVTVERDAKIPRG
FFNCKNVEGEDKSGKDGQQKKRKPSKEQATDKDSSKEKEEPDENHLLIYRNNLVRGVIDK
AQFGDYGLVHTVQEFYGSDTAGKLLSVLSHLFTVYLQMHGFTCGIDDLLLLESKDAKMKD
QLESCEDVGENVYRDFIEVKGVKRKDPVELQLNIENFIRSNGESALASLDRRMISQLNNK
TSNSDVFKQLLLRGLSKPSVKNCIYLMTTSGAKGSVANLQQITSYLGQQELEGKRVPQMI
SGKTLPCFPPWDWSSRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQR
CIIKNLECLKVSYDNTVRDADGSIIQFRYGEDGIDVHMTSFIQKFESLIANKEMFHKKGR
RQMDKLNPYIKDLPLALKEKAEKFVHNLALKEKDHNFQEDFLKLMEHKYLCSLAQPGEPV
GVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAANDIKTPVMTCPLQKG
RSKEEAQELADKLKKITVADIIESMKVTFVPFFIQDGQTCRIYKLEMTLHVPEHLRTIIE
YSSEDWEEILEIVFVRELEDAIQNHILLLSKISGIKNFTPDSQPKASNETDENLSEKRSQ
REEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDEMDYEDGCDDEVREADLSDGDESE
IDEEENEVEIGKDGEIGVIDASDEMPGSPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRA
EMVKKETDRAIFVSAKGFHFEVHFRFTDNEPHILLSQIAQKTAQKVYIQRSGKVADCKQI
TCDENQVLCFGKDPENKQSFSSKEKKEMPALQTTGIDFGTFWQLQDVLDVRYIYSNNIHA
MLNTYGVEAARETIIREINNVFKSYGISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESI
SPFNKMTFETASKFIVEAAYHGQVDRLETPSARICLGLPVNVGTGCFDLMHRMEVECTRR
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcagaggttccgacgacggccgtggatgcgattaggtttggcttcttcacc
gacgaagaggttcggaagcacagctttgtgaaggttaccagcccaattttgttcgatgac
tcaacacacacgcccgtgaatggtgggctttacgacaaggcgatgggcccactaggggat
gaacgcggccaactttgccaaacgtgtggtcagacagcatatacgtgctcgggtcattgt
ggtcatattgaccttgttttgccagcttataatcccttgctgttcaacattctccacaaa
cttctacaaagaacctgtttcttctgctaccatttccggacaagccgacaacatgttgag
aaacatgtttcccaattgaaactcataatgaaaggtgatgttcttggggctaaaaggtta
gagtctgactcacctagtgaatactcagactgcaacgggagtggtaatcacatagacaat
gattcgaagcagcaaggatggacttctcttcagtttacagagataatgtctgttttggat
aaggctttgccgacacatgggaaagagtgcaagaattgcaaggctaaaaatcccaaaatc
agtaaacctacttttggatggttccaaatgagtggcaatgaccatgcgagagaaaatgtc
ctcagagggtgcaacctggagggacccttgactggtcaagatgaagaggcatctatgctt
gaggatgagaattttaacaatgttgctacaagaatgcaaaaaggacaagggagcaaagtg
ctcagtgaattctttaagcagaaaacttccttgtcgggagatctatttccaacagaggtt
aaagaaattattaggcttctgtgggaaaatgaatctcaactctgctcttttattagtgat
atccagtgccaagaaactggaacaaatggaggtcactctatgtttttcttggagactgtt
cttgtaccaccaatcaaattccgtcctccatccaagggtggtgattctgtgatggagcat
cctcaaaccgtcttattaagtaaggtgctggaggcaaatgtttctttgagccaaactctt
accaacttagagcactcaaggacaattcgacggtggagggatcttcaagagagcataaat
gtgatgttcaatagcaaaactgctgctggtcaaggtcaaagagatgcggctcccggaata
tgtcagttgcttgagaagaaggaaggcctgttccggcagaaaatgatgggcaaaagggta
aattttgcgtgccggtctgtcatatctccggatccctacttagctgttaatgagattggg
attcctccatactttgcaacgagattaacatatcctgagagagttactccgtggaatgtt
gacaagttgaggaatgctattgtcaacggttctgaaatccatcctggagctacacaatat
gttgataaatctggtcccaagattttgaggcaaaacaggagagaacgcatttcaatatca
agaaaattaccttcttcaaaaggggctgtcatgcaacatgggaagggctctgataatgac
attgaaagtaaaatagtgcatcgtcacttgcgagatggggacattgtgcttgtcaatcga
cagcctacacttcacaaacccagtataatggcgcatgtagttcgtgtattgaagggggag
aaaacaattcgcatgcactatgctaattgcagtacttacaatgctgattttgatggtgat
gagatgaatgttcattttccgcaagatgaaatttcccgttcggaagcttacaatatcgta
aatgcaaataatcagtacgtaaagccgaccagtggagatcccataagagccttgattcag
gatcatgttataagtgctgtcctccttacaaagaaggatacatttttacgttgggatcaa
tttaatcagcttctttacagttcttgtgtttcagcccgtgtgtcagatgctttctctggc
aaaccagataaaaaagttttcatgtttaactctgaaggcacaatgcagccccttcttcct
gcaatttggaaaccagagcccctttggacaggaaagcaggtcatcactgccttgctaaat
catattactagaggttctccgccagttactgttgaaagagatgcaaaaatcccacgtggt
ttttttaattgtaaaaatgttgaaggagaagataaatctggtaaagatggacaacaaaaa
aagaggaaaccaagcaaagaacaagcaactgataaagatagctcaaaggaaaaagaggag
cctgatgagaaccatttattaatatatagaaacaacttagtgcgcggtgtgattgacaag
gctcagtttggtgattatggtttggtccatacagttcaggagttctatggctcagatact
gcaggaaaattgctttctgtattgagtcatttatttaccgtgtatttgcagatgcatggg
ttcacatgtgggattgatgatcttttgctactggaaagcaaagacgcaaaaatgaaggat
caactagaaagttgtgaagatgtgggtgaaaatgtttaccgtgattttatcgaggtcaaa
ggtgttaagagaaaagatccagtggaactgcaattaaacatcgaaaattttattcggagt
aatggagaatctgccttggcatccttggataggagaatgattagtcagcttaataataag
acctccaattctgatgtgttcaaacaattattgttgagggggttatcaaaaccatctgtt
aaaaattgtatctatcttatgacaacatctggggctaaaggtagtgtggctaatctccaa
caaataacttcatatttgggtcagcaagagctagaaggcaaacgggtccctcaaatgatt
tctggaaagaccttaccgtgctttcccccatgggattggtcatctcgagcaggaggcttt
atcattgatcgttttcttactggtcttcatcctcaggagtactatttccattgcatggct
ggccgtgaagggttggttgatacagctgtcaaaacatctcgtagtggatacttgcaaaga
tgcataataaaaaatcttgagtgcctaaaagtttcttatgacaataccgttcgtgatgct
gatggttccattattcaatttcgttatggagaagatggcattgatgtccatatgacgagc
tttattcaaaagtttgaatctctgatagctaataaagaaatgtttcacaagaaaggtcgt
cgtcaaatggataaattaaatccttatattaaagacttgcctttggctcttaaagaaaaa
gcagagaagtttgtgcataatttggcattgaaagagaaagatcataacttccaagaggat
ttcttgaagttaatggagcacaaatacctttgtagtcttgctcaacctggagaaccagtt
ggtgttcttgccggtcagtctgtaggagaaccgtcaacacagatgacactgaatactttc
catcttgcgggacgaggtgaaatgaatgtgacccttggaatcccacgcctccaagagatc
ttgatgactgctgcaaatgatattaagacgccagttatgacatgcccattgcaaaagggg
agatcgaaggaggaagctcaggagctagctgataagttgaagaagatcactgtggcagac
ataatcgagagtatgaaagtaacctttgtgccatttttcattcaggatggtcaaacttgc
cgtatttataagcttgagatgacactccacgtacctgaacatcttcgaaccatcattgaa
tattcatcagaagattgggaggaaatcctagagattgtgtttgttagggagttggaagac
gccatacaaaatcatattcttttgctttctaaaattagtggtattaaaaatttcacgcct
gattcacaaccaaaggcatcaaatgagacagatgaaaatctttctgaaaaaagatctcaa
cgtgaggaagaagatgatgacaatggtggtgcagatgatggtgaacatggtgaaggggtc
gaggattttggtctggatgcccataagcgaaagctacaagctacagatgagatggattat
gaagacggctgtgatgatgaagtgagagaggcagacttgtcagatggagatgaaagtgaa
attgatgaggaggaaaatgaagttgaaattggtaaggatggtgaaattggggttattgat
gctagtgatgaaatgcctggaagtcctttagaagaagctggggacctagctaagcccaag
tcaaaggagaaaaagaccaaatcaggatcccaaattagaaagaaaaggaaggtccgagca
gagatggtaaaaaaggagactgacagggcaatttttgtgtcagcaaaggggttccacttc
gaggtccattttagatttaccgacaatgagcctcatattttgctgtctcagattgctcag
aagacagcccagaaggtttatattcagagatctggaaaggttgctgactgtaaacaaatt
acatgcgatgaaaatcaagtcctctgctttgggaaggatcctgaaaataaacaaagtttt
tcatccaaggaaaaaaaggagatgccagctctgcaaactactggaattgatttcggtaca
ttttggcaactgcaagatgttcttgatgtcaggtatatttattccaataacatacatgct
atgctgaacacttacggagtagaagccgccagggaaactatcatccgagaaataaataat
gttttcaagtcttacggaatatccgtcaacattaggcatcttacactaatagctgacttt
atgactcatgctggtggttatcgtccattgaatcgattcggaggcatcgtagagtcgata
tctccgtttaataaaatgacttttgagacagcttccaagttcattgttgaagcagcatat
catgggcaggtggatcgcttggaaaccccatccgctaggatctgtcttggattgccagta
aatgtgggtactggatgttttgatttgatgcacaggatggaggttgaatgcacacggaga
tag
DBGET
integrated database retrieval system
