Pseudomonas donghuensis: BV82_4978
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Entry
BV82_4978 CDS
T07361
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw00900
Terpenoid backbone biosynthesis
pdw01100
Metabolic pathways
pdw01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
BV82_4978 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pdw01006
]
BV82_4978 (ispA)
Enzymes [BR:
pdw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
BV82_4978 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
BV82_4978 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
BV82_4978 (ispA)
Prenyltransferases [BR:
pdw01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
BV82_4978 (ispA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
KDN97218
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All DBs
Position
5125298..5126185
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AA seq
295 aa
AA seq
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MIGAYQASCQARVDAALEQLFIAPSVELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGA
APEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPQLSPQQDSIRLAMVQALALAAGPAGMVGGQAIDLGSVGLKLDQTALEFMHRHK
TGALIEASVKLGALASARADQTQLKALQTYAQAIGLAFQVQDDILDVESDTQTLGKRQGA
DIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAAAEPLRELARYIVERRN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgcataccaggccagctgccaggcacgggtcgacgccgccctcgagcaactg
tttatcgccccctcggtggagctcacccgcctgtatgaggccatgcgctacagcgtcatg
aacggcggcaaacgggttcgcccactgctcgcctatgccgcgtgcgaagccctcggcgcc
gccccggaacaggccaacggcgcggcctgcgcggtcgagctgattcacgcctattcgctg
gtgcacgacgatttgccggccatggacgacgacgacctgcgccgtggccagccaaccacc
cacaaggcttttgacgaagcttgcgcgattctcgccggtgacggtctgcagagcctggcc
ttcagcgccctgctcgacccgcaactgagcccgcagcaggacagcatccgcctggccatg
gtccaggccctggcgctggcggccggccctgccggcatggtcggcggccaggccatcgac
ctgggttcggtgggcctcaagctcgaccagacggcgctggagttcatgcaccggcacaag
accggcgcgttgatcgaggccagcgtcaagctcggcgccctggccagtgcccgcgccgac
cagacccagctcaaggccctgcaaacttatgcacaggccatcggcctggccttccaggtc
caggacgatatcctcgacgtcgaaagcgacacccagaccctgggcaagcgccagggcgcc
gacatcgcccgcgacaagccgacctacccggccctgctcgggctcgacgcggccaaggcc
tacgccctggaactgcgcgaccaggccctgcatgccctgcgtccgtttgacgcggcggcc
gagccgctgcgcgagctggcgcgctacattgtcgagcgccgcaactaa
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