Pseudonocardia dioxanivorans: Psed_2987
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Entry
Psed_2987 CDS
T01479
Name
(GenBank) Pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx00240
Pyrimidine metabolism
pdx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Psed_2987
Enzymes [BR:
pdx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
Psed_2987
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
COX2
Motif
Other DBs
NCBI-ProteinID:
AEA25187
UniProt:
F4CR96
LinkDB
All DBs
Position
complement(3168320..3169249)
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AA seq
309 aa
AA seq
DB search
MMPHVTLPPRPASPLDPLVAPEVADALAAGRPVVALESTLLAHGLPAPRNRATASALEDV
VRAHGAVPATVAVLDGRPRVGLDAEALDRICAGGVAKLSMRDLGVAAGLGLDGATTVAAT
AWLAAAAGVEVFATGGLGGVHRGARETWDVSADPATLARTPVAVVCSGVKSILDVGATLE
VLETWSVPVLGFGTDAFPGFYRRDSGVPVPWRVDSPADAAAVWRAHRATGGGLVLAQPVP
VDAELDADLHDRLLADGLAMVAARGIVGKDVTPALLEHFHSGSDGASLETNIALVTANAA
LAAQLAALL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgcacgtgaccctgccgccgcgccccgcttccccgctcgatcctctggtggcc
ccggaggtcgccgacgcgctcgcggccgggcggcccgtcgtggccctggagagcacgctg
ttggcccacggcctgccggcgccgcgcaaccgggcgacggcgagcgcgctggaggacgtc
gtgcgcgcgcacggcgcggtgccggcgacggtcgcggtgctcgacggcaggccgcgtgtc
gggctcgacgccgaggccctcgaccggatctgtgcgggcggggtcgcgaagctctcgatg
cgcgacctgggcgtcgccgccgggctcgggctcgacggtgccacgaccgtcgccgccacc
gcgtggctcgccgcggcggcgggcgtggaggtgttcgcgacgggcgggctcggcggggtg
caccgcggcgcccgcgagacctgggacgtctcggccgacccggcgacgctcgcgcgcacc
ccggtggcggtcgtctgctccggggtcaagtcgatcctcgacgtcggcgccacgctggag
gtgctggagacctggtcggtgccggtgctggggttcgggaccgacgcgttccccggcttc
taccggcgcgactccggggtgccggtgccgtggcgggtcgactcccccgccgacgccgcc
gccgtctggcgggcgcaccgtgccaccggcggcgggctcgtcctggcgcagccggtgccg
gtcgacgcggagctcgacgccgacctccacgaccggctgctcgccgacgggctggcgatg
gtcgcggcgcgcggcatcgtcggcaaggacgtcaccccggcgctgctggagcacttccac
agcggcagcgacggcgccagcctggagacgaacatcgcgctggtgacggcgaacgcggcg
ctcgcggcacagctcgccgcactgctgtga
DBGET
integrated database retrieval system
