Pseudonocardia dioxanivorans: Psed_6533
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Entry
Psed_6533 CDS
T01479
Name
(GenBank) Extradiol ring-cleavage dioxygenase class III protein subunit B
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx00362
Benzoate degradation
pdx00624
Polycyclic aromatic hydrocarbon degradation
pdx00627
Aminobenzoate degradation
pdx01100
Metabolic pathways
pdx01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Psed_6533
00627 Aminobenzoate degradation
Psed_6533
00624 Polycyclic aromatic hydrocarbon degradation
Psed_6533
Enzymes [BR:
pdx01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
Psed_6533
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Gene cluster
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
AEA28622
UniProt:
F4CV76
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All DBs
Position
6912730..6913596
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AA seq
288 aa
AA seq
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MAELVAVIASTHHPFYYRASTATGDDRPPFADEWVRKIEAFRETLTRARPDVLVMVGSDH
FHQLWLDNMPQFLVGKAPFYDANWYNEEREFGLPRMTLAGQEDLSAHVLRHGLDAGFDLA
FSNELRIDHSITCPIITLRPQADLPIVPVYTNIFAPPLPQPSRFVQLGRTIRELVESWPS
DRRVAVIGTGHLSLELGGPRQFGPHGPDPEFDQKAVGWIAGGDIEECLAEVSLESLHAPG
NATHGFMDFMLMMGVAGEGQKADYVDTYDLFHTMEAYFTWYPGGIDGE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctggtcgcggtgatcgcgtccacgcaccacccgttctactaccgggcgagc
accgccaccggcgacgaccggcctccctttgccgacgagtgggtacgcaagatcgaggcg
ttccgcgagaccctcacccgggcccgccccgacgtgctcgtcatggtcgggtccgaccac
ttccaccagctgtggctcgacaacatgccgcagttcctggtcggcaaggcgccgttctac
gacgccaactggtacaacgaggaacgcgagttcggcctgccgcggatgacgctcgcgggt
caggaggacctgtcggcccacgtgctgcggcacgggctcgacgcggggttcgacctcgcg
ttctccaacgagctgcgcatcgaccactcgatcacgtgcccgatcatcacgctgcgtccg
caggcggacctgccgatcgtgccggtgtacaccaacatcttcgcgccgccgctgccacag
ccgtcgcggttcgtgcagctcggccgcacgatccgcgagctcgtcgagtcgtggccgtcc
gaccggcgggtggccgtgatcgggaccggccacctgtcactggagctgggcggcccccgg
cagttcggcccgcacggacccgacccggagttcgaccagaaggccgttggctggatcgcg
ggcggcgacatcgaggagtgcctcgccgaggtcagcctggagagcctgcacgcccccggt
aacgccacgcacgggttcatggacttcatgttgatgatgggtgtcgcgggggaggggcag
aaggccgactacgtcgacacctacgacctgttccacaccatggaggcgtacttcacctgg
tacccgggagggatcgacggtgagtag
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