Pectobacterium parmentieri SCC3193: W5S_0300
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Entry
W5S_0300 CDS
T02514
Name
(GenBank) Arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00540
Lipopolysaccharide biosynthesis
pec01100
Metabolic pathways
pec01250
Biosynthesis of nucleotide sugars
Module
pec_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
W5S_0300
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pec01005
]
W5S_0300
Enzymes [BR:
pec01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
W5S_0300
Lipopolysaccharide biosynthesis proteins [BR:
pec01005
]
Lipid A
W5S_0300
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2529
Motif
Other DBs
NCBI-ProteinID:
AFI88427
UniProt:
A0A0H3I1H6
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All DBs
Position
complement(331417..332454)
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AA seq
345 aa
AA seq
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MSQFEQDAHLKQQSDRALSEHRLQPDFDFQQAGKQVLSIERDGLAQLDQYIDDNFTLACK
KIFNCQGKVVVMGMGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAI
SNSGESHEILSLIPVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTTS
TTATLVMGDALAVALLQARGFTAEDFALSHPGGALGRKLLLRISDIMHSGDEIPHVSHDA
SLRDALVEITRKNLGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIR
VAPNMLAVDALNLMQSRHITSVLVAENDRLVGIVHMHDMLRAGVV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagtttgaacaagacgctcacctaaaacagcagtctgaccgtgcactatccgaa
catagactacaacccgatttcgatttccagcaggcgggcaagcaggtactgagtatcgaa
cgcgatgggcttgcgcaattagatcagtatattgacgacaattttaccctcgcctgcaaa
aagatctttaactgccagggcaaagtggtggtgatgggaatgggcaaatccggtcacatc
ggttgcaagattgccgcaaccttcgccagcacgggtacacctgcttttttcgttcatccg
ggcgaagccagccacggtgacctcggcatggtgacgccgcacgatatcgtgatcgcgatt
tccaattctggcgaatcccatgaaatcctgtcgctgatccctgttctgaaacgccagaaa
gtgttcctgatctgcatgaccagcgcaccagaaagtacgatgggtaaagcggcggatata
cacctgtgcgtccacgttccgcaggaagcctgcccgctcggtctggcacccaccaccagc
accaccgcaacactggtcatgggcgacgcactcgccgtggctttgctacaggcgcgcggt
tttactgccgaagatttcgccctatctcaccccggtggcgcacttggccgcaaactttta
ctgcgtatcagcgatatcatgcattcgggcgacgagatcccccatgtctcacacgatgcc
tcactgcgtgatgcgctggtggaaattacgcgcaaaaatctgggtatgacggtaatctgc
gaagcggatatgaaaattcagggtatctttaccgatggtgacctgcgccgcatcttcgac
atgaatattgacttgaacagcgcgcgcattgctgatgtgatgaccgcgggcggcatccgg
gtcgcgccgaacatgctggcggtagatgcacttaacctgatgcagtcgcgccacatcacc
tcagtgctggtggcagaaaacgatcgtctggtcggtattgttcatatgcacgatatgttg
cgggctggcgtggtttaa
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