Pectobacterium parmentieri SCC3193: W5S_3275
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Entry
W5S_3275 CDS
T02514
Name
(GenBank) tRNA sulfurtransferase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00730
Thiamine metabolism
pec01100
Metabolic pathways
pec01240
Biosynthesis of cofactors
pec04122
Sulfur relay system
Module
pec_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
W5S_3275
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
W5S_3275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pec03016
]
W5S_3275
Enzymes [BR:
pec01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
W5S_3275
Transfer RNA biogenesis [BR:
pec03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
W5S_3275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AFI91349
UniProt:
A0A0H3I5V1
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All DBs
Position
complement(3526147..3527595)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDESQR
GAIRDALTRIPGIHHILEVEDHAYTDVHNIFEQALVLYRERLEGKTFCVRVKRRGKHEFS
SQDVERYVGGGLNQHIETARVNLTAPQVTVHLEIEQDRLLLIKGRYEGIGGYPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFI
AIDFDPVVGEILEKVDDGQMGVVLKRMMVRAASKIAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKQARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EAEEGHFDFAILDRVVSEARNIDIREIAEQTKQDVVEVETVASFAPTDVLLDIRAPDEQD
DKPLQLEQIEIKSLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFSNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcggttg
cgctttatcaagattctaaccggaaacattcgcaacgtattaaaacactatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgaagttcgggccaaagacgaaagccagcgt
ggagcgattcgtgatgcgctgacgagaattccgggtattcatcatattctggaagttgaa
gatcacgcctataccgacgtgcataacatctttgaacaggcgttggtgctgtatcgtgaa
cgtctggaaggcaagacgttttgtgtacgagtaaaacgccgcggtaagcatgagtttagt
tcacaagacgtggaacgctatgtcggcggcgggctgaatcagcacattgaaacggcgcga
gtcaatctcaccgctccgcaggtcactgtgcatctggaaatcgagcaggatcgtctgttg
ctgattaagggccgttatgaagggattggcggctatccgatcggtacgcaggaagatgta
ctgtcactcatttccggtggtttcgattccggtgtatccagctatatgttgatgcgccga
ggatgccgcgtgcattactgcttcttcaatcttggcggtgcagcacacgagattggtgtg
aaacaggtggcgcattatttgtggaaccggtttggtagttcacatcgggtgcgttttatt
gctattgatttcgatcccgttgttggtgaaattctggagaaggtcgacgacgggcagatg
ggcgtcgtcttgaagcgcatgatggtgcgtgcggcctccaaaatagctgagcgttatggc
gttcaggcgttggtgactggcgaagcgctagggcaggtttccagccagacgctgactaac
ctgcgtttgatcgacaatgcttccgataccctgattttacgcccgctgatctctcatgat
aaagagcacattatcaaacaggctcgcgaactggggacggaagatttcgccaaaacgatg
ccggaatattgcggtgtaatctccaaaagcccgacggtgaaggccgtgaaagcgaagatt
gaggccgaggaaggccactttgactttgctattctggatcgcgtggtgagtgaagcgcga
aatattgatatccgtgagatcgccgagcagaccaagcaagacgtggttgaagtcgaaacg
gtcgcatcatttgcgccaactgacgtgctgctggatatccgcgcgccggatgaacaggac
gataagccgcttcaactggagcagatcgaaattaaatccttaccgttctacaagctgggt
acgcagtttggcgatttggatcagagtaaaacctatttgctttactgcgagcgcggcgtg
atgagccgtttgcaggcgttatatttgcgtgagcaaggtttcagcaatgtgaaggtatac
cgtccgtaa
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