Pectobacterium parmentieri SCC3193: W5S_4403
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Entry
W5S_4403 CDS
T02514
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00071
Fatty acid degradation
pec00280
Valine, leucine and isoleucine degradation
pec00310
Lysine degradation
pec00362
Benzoate degradation
pec00380
Tryptophan metabolism
pec00410
beta-Alanine metabolism
pec00640
Propanoate metabolism
pec00650
Butanoate metabolism
pec00907
Pinene, camphor and geraniol degradation
pec00930
Caprolactam degradation
pec01100
Metabolic pathways
pec01110
Biosynthesis of secondary metabolites
pec01120
Microbial metabolism in diverse environments
pec01200
Carbon metabolism
pec01212
Fatty acid metabolism
Module
pec_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
W5S_4403
00650 Butanoate metabolism
W5S_4403
09103 Lipid metabolism
00071 Fatty acid degradation
W5S_4403
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
W5S_4403
00310 Lysine degradation
W5S_4403
00380 Tryptophan metabolism
W5S_4403
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
W5S_4403
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
W5S_4403
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
W5S_4403
00930 Caprolactam degradation
W5S_4403
Enzymes [BR:
pec01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
W5S_4403
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
W5S_4403
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
W5S_4403
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
W5S_4403
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF6471
Motif
Other DBs
NCBI-ProteinID:
AFI92449
UniProt:
A0A0H3IBM6
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All DBs
Position
4754820..4757009
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AA seq
729 aa
AA seq
DB search
MLYQGESLYLNWLEDGIAELVFSAQGSVNTLDTRTVASLGKALDVLAEQPNLKGLLLRSD
KPAFIVGADITEFLSLFAAPAEKLHEWLAFANRIFNRLEDLSVPTLSAINSYALGGGCEC
VLATDFRLATPDARIGLPETKLGIMPGFGGTVRLPRLLGADSALEIIAAGKDVSAVDALK
VGLVQAVVANEKLIPAAIKMLKQAINGELDWQAYRRPKLEALKLSKIEAMMSFTTAKAMV
LQTAGKHYPAPMLAVKTIEAAATMTRDDALQLETQHFVQLARSNEARALVGIFLNDQYVK
GKAKKLIGETSVPQQAAVLGAGIMGGGIAYQSAFKGVPIRMKDISEKPLALGMNEAAKLL
NKQMERGKLDGMKMAAILASIQPTLDYAGFERTDIVVEAVVENPKIKASVLAETESHISE
STILASNTSTIPITTLAASLERPQNFCGMHFFNPVHRMPLVEIIRGPKTSDSTIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRDIDNVMEKKFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPQRMAKDYRDAIDVLFEHQRFGQKNGQGFYRYQTDGKGKQ
RKERDDAVDTLLKDISQPKKTFSAEEIIARMMIPMINEVARCLEEDIVASPAEADMALVY
GLGFPPFHGGACRYLDTLGSERYVEMAQSLAHLGTIYQVPDGLQQKARSNEGYYPSVAPH
ADISHGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaggtgaatccctctaccttaactggcttgaggacggcattgccgagctg
gtattttctgcccagggctccgtaaacacactagatacacgcacggttgccagcctaggt
aaagcgctcgacgttctggcggaacagccgaacctgaagggcttactgctgcgttcggat
aaacctgcatttattgtcggggccgatatcacggaattcctttctctttttgccgcacca
gccgaaaaactgcatgagtggctggccttcgccaaccgtattttcaaccgccttgaggat
ttatccgttcccacactgtccgcgattaatagctatgcgttgggtggcggctgtgaatgc
gtgctggcgaccgattttcgcttagccacaccggatgcacgtatcggcttgcccgaaact
aaactcgggatcatgccgggttttggtggcacggtcaggctaccacgtctgctgggtgct
gatagcgcgctggagattatcgccgcaggtaaagacgtcagcgcggtcgatgctttaaaa
gtggggctggtgcaggccgttgtcgcgaatgaaaaactgattcccgccgctatcaaaatg
ctaaaacaggctataaatggcgaattagactggcaggcttatcggcgcccaaaacttgag
gcgctgaagctcagtaaaattgaagctatgatgagctttaccaccgccaaagcgatggtg
ctgcaaaccgccgggaaacattatccggcaccgatgttagcggtaaaaaccatcgaagcc
gccgcaaccatgacgcgagatgacgccttgcagctcgaaacgcagcacttcgttcaactg
gctcgctcaaatgaagcccgcgccctcgtcggtattttcctcaacgatcaatatgttaaa
ggcaaagcgaagaagctgatcggcgagacatctgtgccacagcaggccgccgtactaggt
gcaggaattatgggcggcggaattgcctatcagtccgcgttcaaaggcgtgccgattcgg
atgaaagacatcagcgagaaaccgctcgcactggggatgaatgaagcagccaaactcctg
aataagcagatggaacgaggcaagctggacggaatgaaaatggcggcgattctggccagt
attcagccaacgctggattacgccgggttcgagcgtaccgatatcgtggttgaagccgtg
gtagaaaacccgaaaatcaaagccagcgtattagcagaaaccgaatcgcacattagcgaa
agtacgattctggcttcgaatacctcaacgattcccattactacactggctgcttcgtta
gaacgaccacaaaatttctgcggtatgcacttcttcaacccagtacaccgcatgccgctg
gttgaaattattcgcggccccaaaaccagtgacagcaccatcgccagcgtggtggcttac
gccagcaaaatgggcaagacaccgattgtcgtgaacgactgccccggattcttcgtgaat
cgcgtcctatttccctactttgcggcattcagcttattgctcagagacggtgccgatttc
cgcgatatcgataatgtcatggagaaaaaattcggttggccgatgggccctgcttatctg
cttgacgttgtcggtattgataccgctcaccatgctcaggccgtgatggctgagggcttc
ccacagcgcatggcgaaagactatcgcgatgcgattgatgtgctgtttgaacaccaacgt
ttcgggcagaagaatggtcaaggcttctaccgttatcaaacggatggcaaggggaaacag
cgtaaagagcgagatgacgccgtagatacgctccttaaagacatcagccaaccgaaaaaa
accttcagtgcagaagagattatcgctcgcatgatgatcccgatgattaatgaagtcgcg
cgttgcctggaagaagacatcgttgccagtccggccgaagcagacatggcgctggtatac
gggctaggttttcctcccttccacggcggagcctgccgttatctggataccttgggcagc
gaacgttatgtcgaaatggcgcagtcgttggcacacctcggcaccatctatcaggtgcca
gacggcttacagcaaaaagccagaagcaatgaaggctattacccatcggtcgcgccacac
gcggacatttcccacggacaaccggcatga
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