Phycodurus eques (leafy seadragon): 133407382
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Entry
133407382 CDS
T09682
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133407382 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133407382 (polr1a)
Enzymes [BR:
pee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133407382 (polr1a)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
133407382 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
133407382
NCBI-ProteinID:
XP_061541184
LinkDB
All DBs
Position
9:1403232..1447717
Genome browser
AA seq
1686 aa
AA seq
DB search
MLFMKEAPWRRLEGMSFGMYSTEEIRKLSVKAITNSKLLDGVGNAAPNSLYDLALGPADN
KEVCSTCCQDFNNCPGHLGHVELPLPVYNPLFFDKLFLLIRGSCLKCHMLTCPRAAVHLL
LNQLKLLDHGAMHQVYHVEEVLNQFLEATDKATADDIAAMLKEFTDSVVVTDGSGNSKPI
RHLVEKKSSLINDFWKIHMKSRNCPHCRCKRFTVRREHNSKLIVTMPSESKTSGKTVGVT
TGDKAYMTASTAREHANKLWENEGFFLKCLFSGLVNNSGLNEEQMGFSPAHFFMELLVVP
PCRYRPNNQLGDQMFTNGQTVNMQAVMKDCTIVRKLLSLIAAENGTSQDEQSQAKEETDQ
SILSGIPGLTLTDKLYNIWVRLQTHVNIVFDSDMDKMMTEKYPGIRQLLEKKDGLFRKHM
MGKRVDYAARSVICPDMYIETNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPNVHP
GATMVISEDGRRTILSTTSFAQREAVAKQLLTPSLGPLKMPMKIVNRHIKNGDVLLLNRQ
PTLHRPSMQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHVPQSELGRAEAYTLVS
TNQQYLVPKDGKPLAGLIQDHMVSGTRMTIRGCFFTRDQYTELVYRGLTDKPGRIKILPP
AILKPQKLWTGKQVVSTVVLNVIPEKDLPLNLVGKSKIPSKAWIQVPPRAAPGYRPDTMC
DSQVVIRQGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTAYLQLYR
GFTLGVEDILVKPGANKKRKRIIQQSLKIGARALRSAFNLPPDVDEAEARSHWQDAHLTP
DQRDFSTADHKFKEVANQVNNDINKVCMPVGLHTSFPDNNLQLMVQSGAKGSTVNTMQIS
CLLGQIELEGRRPPLMPSGKSLPCFQPYDPAPSAGGFVSGRFLTGIKPQEFFFHCMAGRE
GLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQ
PRQFPFIEDNFEVIKKSQGLDEVLTRLDTQGASRHFSAIQRWKAKRELTSPRRGAFLLFS
QKKMARLKQTEQGAIQNVCGRDMAVLKLVEQWRALDEAGRSKYKRKSSRCPEPSLGVFRP
DVSFGSVSESFRDLTEKYLQNRDPMSQHNLDTDRLRQLLHYKWQRSLCDPGEAVGLLAAQ
SIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASGKIKTPMMSVPVLYSKKALKK
AQKLRRKLTKVCLAEVLHKVDVVEALRIEGHRHSKMRTFKITFSFLHPNCYAEDTLLSPQ
QILHYMETRFFVLLLKAIEKHSAKMASIAVETRKATARDISNVNEELADAAGGDDGEEDQ
REIVDDQGDEGDADASDAKRRDKQEEEVDYDSEDEGEDEDNVAEEEEEGNGEIGVDEFHP
ESSSVRLQTKKRAAKSRRGKEATDQMRVNAVLNSHPAIEGYCYDVKHELWCEVNLALSVS
KVHFDLTSVVTTLAQDAVVMETSGLTRCLLSETTTKTGDKEMVLNTEGINMHEMFKHSDI
LDVNRLYSNEVHAMAKTYGIEVALKVIEREIKDVFAVYGIEVDPRHLSLVADYMCFEGVY
NPLNRHSITSNSSPLQQMTFETSYKFLKQATMLGSRDQLESPSACLVVGKVVKGGTGLFE
LKQPLQ
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttatgaaagaagcgccatggcggcgattggagggcatgtcttttggcatgtac
tctaccgaagagataaggaagctgagtgtgaaggcgatcacaaactcaaagttgctcgat
ggcgttgggaatgcggccccaaacagcttgtacgacttggccctgggaccagcagacaac
aaagaggtatgttcaacttgctgtcaggatttcaacaactgtccaggacacctgggacat
gtcgaactgccgctacctgtgtacaacccactattttttgataaactctttctgctgatt
cgtggctcatgtctgaagtgccacatgttgacatgtccacgggcagccgtccaccttctg
ttgaaccaactgaaattactggaccatggagccatgcaccaggtttaccacgttgaagaa
gttcttaaccagtttctggaggcgacggacaaagccactgctgatgatattgcagccatg
ctcaaagaattcacagattcagttgttgtaactgatggctcaggaaacagcaaaccgata
agacaccttgttgaaaagaaaagcagtttgataaatgatttttggaaaatccacatgaaa
tctcggaactgtccccactgcaggtgcaagcggttcaccgtacgacgtgagcacaacagt
aagctgatcgtcacaatgccttcggaatcaaaaacttctggaaaaactgtgggcgtgacg
actggagacaaagcctacatgactgccagtactgcaagagaacacgccaacaaattgtgg
gagaatgaaggttttttcctgaaatgtctgttctccgggttggtgaacaactcgggatta
aatgaagagcaaatgggtttctctccggctcacttcttcatggagctacttgtggtccca
ccttgcaggtatcgtccaaacaatcaactgggcgatcagatgtttaccaatggtcagacg
gtcaacatgcaagccgtcatgaaggactgtacaattgtgagaaaactgctttctctcata
gctgctgagaatggaacttcgcaagatgagcagtctcaggcaaaagaagagacagaccag
tctattctctcagggattcctggactgacattaaccgataaactttacaacatctgggtc
cgtcttcagacccacgtcaacattgtctttgacagtgacatggacaaaatgatgacagaa
aagtaccctggaatcagacagctcctggagaaaaaggatggattgttccgaaaacatatg
atgggaaaaagagttgattatgccgcaagatctgtcatctgtccagatatgtacatcgaa
accaatgagatagggattcccatggtgttcgctacgaagctgacctacccacagcctgtc
acgccatggaacgtgaaggagcttcgtcaggcagttctgaatgggccaaatgtacacccc
ggtgctacgatggtgattagcgaggatgggaggagaaccatcttgtcaaccaccagcttt
gcacaaagagaagcggttgctaagcagctgctgacgccctctctaggtccactcaagatg
ccaatgaaaatagtgaaccgccacattaagaacggagatgttttgttgttgaacagacag
ccaactctgcaccgaccatcaatgcaggctcactgtgcacgcattttgcctggagagaag
gtcctgaggcttcactatgccaactgcaaagcatacaatgcagactttgatggcgatgag
atgaatgctcacgtccctcagagtgagcttggtcgagcggaggcctacacgttagtcagc
accaaccaacagtaccttgtgccaaaggatggaaagcctttggctggtctgatacaagac
cacatggtgtcgggtacacggatgacaatccgaggctgtttcttcacgagagaccagtac
actgaacttgtgtacagaggactgactgacaaaccgggccgaattaaaatcctcccacca
gctatactcaagccacagaaactctggacaggaaagcaggtggtgtccaccgtcgtcctc
aatgttattccagaaaaggatttgccattaaacctggttgggaaatcgaaaatccccagc
aaagcatggatccaagtccccccacgagcagctccagggtatcgacctgacaccatgtgt
gactcgcaggtggtgatccgtcagggggagttgttagtgggtgttctggacaaagctcac
tatggctcatcagcatatggtctggtccattgttgctatgaactttatggaggggagacc
agcggcaaactgctcagctgtctcgccagactctttactgcctaccttcagttatataga
ggattcactctgggtgttgaggacatcctggtgaaaccgggtgcgaacaaaaaaaggaaa
cgcattattcaacaatcactaaagattggtgcaagagccctccggtcagcattcaacctc
ccccctgatgtggatgaagcagaagccaggagccattggcaggatgctcatctcacccca
gaccaacgggatttcagcacggctgaccacaaattcaaagaagtggccaaccaagtgaac
aatgacattaacaaggtgtgcatgccagttggccttcacacgtcgttcccagacaacaac
ctccaactgatggtccagtcaggtgccaagggttccaccgtcaacaccatgcagatctca
tgtctactaggtcagattgagttagagggtcgtagacctccactgatgccctctgggaaa
tcattaccatgtttccagccatatgacccagcgcccagtgctggtggatttgtttctggc
aggttcctcacaggcatcaaaccacaggaatttttcttccattgcatggctggcagagag
ggactggtggataccgctgtaaaaacgtccagatcaggatacctgcagcggtgtgtcata
aagcatctggagggtttggtggtacagtatgatctgactgtgagggacagtgatggatcc
gtagtccagttcctgtatggcgaagatgggcttgatatccctaagacacaatttctgcag
ccaaggcagtttcccttcatagaggacaactttgaggtaatcaagaagtcccaggggttg
gatgaggtgttgacacgattggacactcaaggtgcaagtcggcatttttccgccatacaa
cgctggaaagcaaagagagagttgacttcccctcgcagaggagcattcctattgttttcc
caaaagaagatggccaggcttaagcagaccgaacaaggagcaatacaaaatgtgtgcggc
agagatatggctgtgcttaagctggtggaacagtggcgtgctcttgatgaagctggacga
tcaaaatacaaaagaaagtcctcccgctgccctgagcccagcctgggcgtgttcaggcct
gacgtaagctttggatccgtttctgaaagctttcgtgacctcacagagaaatacttgcag
aatcgagacccaatgagtcaacacaacttggatacagacagacttcgacagttgttgcat
tacaagtggcagcggtcactgtgcgatccaggggaagcggtgggtctgctggcagctcag
tccattggtgagccctcaacccaaatgaccctcaacaccttccacttcgctggcagggga
gagatgaatgtcacattgggaatacctcgacttagagagatactaatggtggccagtggc
aaaatcaagacgccaatgatgagtgttccagtgctgtacagcaagaaagccttaaagaaa
gctcagaagctccgtagaaaacttaccaaggtctgcttggctgaggtactgcacaaggtc
gatgtggttgaggcgctgcgcattgagggtcaccgtcactcaaagatgcggacatttaaa
atcacttttagctttcttcatcctaactgttacgctgaagatacgctgctctcaccccaa
cagattctccactacatggaaaccagattttttgtactgctccttaaagccattgaaaaa
catagcgccaagatggcatccattgctgtggagaccaggaaggccaccgccagggacata
tccaatgttaatgaggaattggctgatgcagcagggggggatgacggggaagaagatcag
agagagatagttgatgaccagggggatgaaggtgatgctgatgcgtcagatgccaagaga
agagacaagcaagaagaggaagtcgattatgacagcgaggacgaaggtgaggatgaagac
aatgtggcggaggaggaggaggaggggaatggggagatcggtgtggatgaattccatccg
gagtcctcgagcgtgagattgcagacgaaaaagagagcagcaaaaagtaggcgaggaaaa
gaggctacagatcagatgagagtgaacgctgttctgaattcccacccggcaatagagggt
tactgctacgacgtcaagcatgaactctggtgtgaagtgaacctggctttgtcagtgagc
aaagtgcactttgacctgacatcagttgtgacaacactggcccaggacgccgtcgtcatg
gaaaccagcggcctgactcgatgccttctgagtgagaccacaacgaagactggagacaaa
gagatggttctcaacacggagggcatcaacatgcacgaaatgttcaagcacagtgatatc
ttggatgtcaacaggctctattccaatgaggtccacgccatggcgaaaacgtacgggatt
gaagtggctctcaaagttatagagagagaaattaaagatgtctttgcagtttatggtatc
gaggtggaccccagacatctgtcactagtagcagactacatgtgctttgagggggtgtac
aacccgctgaaccgccattccatcacatccaactcctcccctctgcagcagatgactttt
gagaccagctacaaattcctcaaacaggctaccatgctgggctctcgtgatcagctcgag
tctccatcagcctgcctggtggtgggaaaggtcgtcaaaggaggaacaggactttttgaa
ctcaagcaacctctgcaatag
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integrated database retrieval system
