Candidatus Pelagibacter giovannonii: E5R92_05540
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Entry
E5R92_05540 CDS
T06537
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
peg
Candidatus Pelagibacter giovannonii
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peg03009
]
E5R92_05540 (rsmD)
Enzymes [BR:
peg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
E5R92_05540 (rsmD)
Ribosome biogenesis [BR:
peg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
E5R92_05540 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_16
MTS
Methyltransf_31
Met_10
MethyltransfD12
Methyltrans_SAM
DNA_methylase
Methyltransf_15
Methyltr_RsmB-F
BpsA_C
N6-adenineMlase
RsmJ
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
QIZ21243
UniProt:
A0A6H1Q4F7
LinkDB
All DBs
Position
complement(1016066..1016632)
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AA seq
188 aa
AA seq
DB search
MRIISGNLKGKKILLPKDKLTRPLKDLTKESIFNILKHSKLLNVELENSNILDLFSGVGS
FGLECLSGGAKNVTFLENYTEVLNILKKNINNLNQQNQTKIIENDIFSKNTFKILNEKFD
IIFMDPPYKEKKLPFLLNAITELKLLNTNGVIIIHRHKKEKDDLPKEFNLILEKSYGISK
IIFGNILN
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagaataatttcaggaaaccttaaagggaaaaaaattcttctacctaaagataaactt
acaagacctcttaaagatttaacgaaagaatcaatttttaacattttaaagcattctaaa
ttattgaatgtagagttagaaaattctaatattttggatttattttcaggcgttggatca
tttggtctcgaatgtttatctggaggtgctaaaaatgttaccttcttagaaaattacacg
gaagtattaaatattttgaagaaaaatataaataatttaaatcagcaaaatcagacaaaa
ataattgaaaatgatattttttctaaaaatacatttaaaatattaaacgagaaatttgat
attattttcatggatcctccctataaagagaaaaaattaccatttctgttgaatgcaata
actgaattaaaactactcaatactaatggagtcataattattcacagacataaaaaagaa
aaagatgatttaccaaaagagtttaatctaattttagaaaaaagttatggtatttcaaaa
attatatttggaaatattttaaattaa
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