Planctopirus ephydatiae: Spb1_26240
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Entry
Spb1_26240 CDS
T06220
Symbol
tetA_1
Name
(GenBank) Tetracycline resistance protein, class C
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
peh
Planctopirus ephydatiae
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
peh02000
]
Spb1_26240 (tetA_1)
01504 Antimicrobial resistance genes [BR:
peh01504
]
Spb1_26240 (tetA_1)
Transporters [BR:
peh02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
Spb1_26240 (tetA_1)
Antimicrobial resistance genes [BR:
peh01504
]
Gene variants
Tetracycline resistance genes
Transporters
Spb1_26240 (tetA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
MFS_4
MFS_2
TRI12
Motif
Other DBs
NCBI-ProteinID:
QDV30690
UniProt:
A0A518GPZ9
LinkDB
All DBs
Position
3274183..3275475
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AA seq
430 aa
AA seq
DB search
MSSPTFRELPPESLKGGGQKQAGIQFILCTLLLDVLGIGLIIPVLPDLVKMLAGKDNSDA
SLWYGSLITAYATMQFLFAPLIGALSDRFGRRPVLLTSIAVLTFDFLLTAFAPNLWWLLV
ARILSGMTAANITAANAYIADISDETTRVRNFGLAGAMFGLGFVLGPLLGGFAGSYSSRL
PFLLAALLSAVNFLYGWLVLPESLPANARHWPRRSSFFPGTSLRSLRVEPVVFGLAIAYF
CVSFGEMTLRSTWILFTEERFHWDAFQNGLALSMVGLMTAFVQAVLVRRFNNRFGERAAL
LTGLFISMLAYIGYALATRGEMMFAIIMLSSLGGISGPTAQSIIAKRVDPKTQGQVQGAL
SSIASLTAILAPSLGTGAFWYFTHAPQKLYFPGIPFVIAAIFAFLALLITAWVTQSISTS
HKAIEPSHHT
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcccacattcagagaacttccgcctgaatcgcttaaaggcggaggccaaaaa
caagcaggaattcagttcatcctctgcacacttctactggatgttttagggattggactg
attattccggttctaccggatctggtgaaaatgctggctgggaaggacaattcggacgca
tccctgtggtacggctcactgattacagcctacgccaccatgcagtttctgttcgcgcca
ctgatcggtgcgctttcagatcggtttggtcgccgaccggtgctgctgacaagtattgca
gtgctgacgttcgattttctgctgacagcttttgcgcccaatctctggtggttacttgtg
gctcgcattctttccggaatgactgccgccaacattacagcagccaatgcttatattgct
gacatcagtgacgaaacaacccgcgttcgcaattttggtcttgcgggcgcaatgtttggt
cttggatttgttctgggcccactcttaggagggttcgccggcagctacagttcgaggtta
ccgtttctactggcagcactgttatcggccgtcaactttctttatggctggttggttttg
cctgaatctttacccgccaacgcgcgtcactggccacgcagatcgtcattctttccggga
acatcactgcggtcactgcgcgtcgagcctgtggtttttggactggcgatcgcctatttc
tgtgtcagttttggagaaatgaccctacgttcaacttggattctctttactgaagaacgc
tttcattgggatgcctttcagaatggactggccctttcgatggtgggcctgatgacggct
tttgtgcaggctgtgcttgtccgcagattcaataaccggtttggagaacgggcagctctg
ctcactggacttttcatttcgatgctggcgtatatcggctatgccttggcaacccgcggc
gagatgatgttcgcgatcatcatgctcagttcactgggtggaatatctgggccaacggct
caatcgattattgccaaacgcgttgatccgaaaactcaaggacaagtgcaaggggcgctc
tcgagcattgccagcctgaccgccattctggcaccatcgctcgggacaggagccttctgg
tactttacccacgctccgcagaagctctacttccctggaatccccttcgtaatcgctgcg
atctttgcattcctggctctgctgattactgcctgggtcacacagtcaatctcgacatct
cataaagcgatagaaccgagccaccatacgtaa
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