Phycicoccus endophyticus: H9L10_04155
Help
Entry
H9L10_04155 CDS
T06776
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pei
Phycicoccus endophyticus
Brite
KEGG Orthology (KO) [BR:
pei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pei03009
]
H9L10_04155 (rimO)
Enzymes [BR:
pei01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H9L10_04155 (rimO)
Ribosome biogenesis [BR:
pei03009
]
Prokaryotic type
ribosomal protein modification factors
H9L10_04155 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF3079
Motif
Other DBs
NCBI-ProteinID:
QNN50243
UniProt:
A0A7G9R3R8
LinkDB
All DBs
Position
863228..864646
Genome browser
AA seq
472 aa
AA seq
DB search
MTTRATRGSVALVTLGCTRNEVDSEELAGRLAADGWRLVEDAADADVAVVNTCGFVEQAK
KDSIDTLLEAADLKESGRTRAVVAVGCLAERYGRTLAEELPDADAVLGFDSYAQMSTHLQ
SVLAGGRPPAHVPGDRRRLLPLAPLARPAASGAVALPGHGGPVVRARLGSAPWAPLKIAS
GCDRRCAFCAIPSFRGSFVSRRPSEVLDEARWLAGEGVRELLLVSENSTSYGKDLGDLAL
LEALLPELAAVEGVERVRVSYLQPAEVRPGLLETMAATPGVCAWYDLSFQHASTPVLRRM
RRFGGTEAFLGLLEGVRERQPAAGARSNVIVGFPGETEADVEELERFLLAARLDVVGVFG
YSDEDGTEAEGLPGHLRPEVVAERVERVTGLVEELTAQRALERVGEPVTVLVEEHDEDED
GLVLGRAEHQGPEVDGVCLLRVPAGRPRPQVGTFLQGAVVGAEGVDLLVEAR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccgtgcgacccgcggcagcgtggcgctcgtcaccctcggctgcacccgcaac
gaggtcgactccgaggagctcgccgggcggctggccgccgacgggtggcgcctcgtcgag
gacgccgccgacgccgacgtcgcggtggtcaacacgtgcggcttcgtcgagcaggccaag
aaggactccatcgacaccctcctcgaggccgccgacctcaaggagagcggacgcacccgg
gccgtcgtcgccgtcggctgtctcgccgagcgctacgggcgcaccctcgccgaggagctc
ccggacgccgacgcggtcctcggcttcgactcctacgcgcagatgtccacgcatctgcag
tcggtgctcgccggcgggcggccgccggcccacgtccctggcgaccgccgccggctgctg
ccgctggcgccgctcgcccggccggcggcctccggcgcggtcgcgctgccgggccacggc
gggccggtggtgcgcgcccggctgggctcggctccctgggctcccttgaagatcgcgagc
ggctgcgaccggcgctgcgccttctgcgccatcccctccttccggggctcgttcgtctcc
cgccgtccctccgaggtcctcgacgaggcccgctggctcgccggcgagggggtgcgcgag
ctgctcctcgtcagcgagaactcgacgtcctacggcaaggacctcggcgacctcgcactg
ctcgaggcgctgctgcccgagctcgcggcggtcgagggggtcgagcgggtccgggtgtcc
tacctccagccggccgaggtccgccccgggctgctcgagacgatggccgcgacacccggc
gtgtgcgcctggtacgacctgtccttccagcacgcctccacgccggtgctgcggcggatg
cggcgcttcggggggaccgaggccttcctcgggctgctcgagggggtgcgcgagcggcag
ccggccgcgggggcccgcagcaacgtcatcgtcggtttccccggcgagaccgaggccgac
gtcgaagagctcgagcggttccttctcgccgcccggctcgacgtcgtcggtgtcttcggg
tactccgacgaggacggcaccgaggccgaagggctcccgggccacctccgcccggaggtc
gttgccgagcgggtcgagcgggtgacggggctcgtcgaggagctcacggcgcagcgggcg
ctcgagcgggtcggcgagccggtcaccgtcctcgtcgaggagcacgacgaggacgaggac
ggcctcgtgctcgggagggccgagcaccaggggccggaggtcgacggcgtctgccttctg
cgcgtccccgccgggcggccccgcccgcaggtcggcacgttcctccagggtgccgtcgtc
ggggccgagggggtcgacctgctcgtggaggcccgatga
DBGET
integrated database retrieval system
