KEGG   Phycicoccus endophyticus: H9L10_05440
Entry
H9L10_05440       CDS       T06776                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pei  Phycicoccus endophyticus
Pathway
pei03030  DNA replication
pei03410  Base excision repair
pei03420  Nucleotide excision repair
pei03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H9L10_05440 (polA)
   03410 Base excision repair
    H9L10_05440 (polA)
   03420 Nucleotide excision repair
    H9L10_05440 (polA)
   03440 Homologous recombination
    H9L10_05440 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pei03032]
    H9L10_05440 (polA)
   03400 DNA repair and recombination proteins [BR:pei03400]
    H9L10_05440 (polA)
Enzymes [BR:pei01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     H9L10_05440 (polA)
DNA replication proteins [BR:pei03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     H9L10_05440 (polA)
DNA repair and recombination proteins [BR:pei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     H9L10_05440 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H9L10_05440 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_pol_lambd_f HHH_5 HHH
Other DBs
NCBI-ProteinID: QNN50448
UniProt: A0A7G9R4C3
LinkDB
Position
1118783..1121488
AA seq 901 aa
MLVRLPRVKLLLLDGHSLAYRAFYALPVENFSTSTGQHTNAVYGFTAMLINVLRDEAPTH
VGVAFDVSRETFRLREYSEYKAGRSATPSEFSGQLPLLREVLDALRIRHVGLPGFEADDV
IASLTRQAVEAGGEVVVCTGDRDAFQLVSDRVTLLYPVRGVSEVWRMDPAAVEERYLVPP
QRYSDLAALVGETSDNLPGVPGVGPKTAAKWLGRYGDLAGVVAHVGEIGGKAGENLRAHL
DDVLRNRRLNRLVDDLDLPLSVEELERSSWDREEVHRVFDGLEFRVLRERLFQTFEVESD
EVEGGFDVGEAVFTADDLEARFGEGGVGRTVTHGVVVSGQYRAAEGDATAVALAGEDGAT
ASLDLATLTPEQERLLAGWLADPAAPKVLHDAKPQLQALSTRGLALRGVVSDTALAAYLV
RPDQRSYDLEDLVVRHLGRELSAEGDATSDQGRQGTLDFDAEDGSAQRDAMVRARAVLEL
SEALAEKVEETGGTALLRDLELPLVDILAEMERTGIAVDEGALSALEADFAGKMRQAQQD
AYDAIGREDVNLGSPKQLQEVLFDQLDMPKTKRTKTGYTTDADALADLYVKTEHPFLEAL
LRHRDTSRLRVTVEGLIKSVAADRRIHTTYLQTIAATGRLSSTDPNLQNVPIRTEEGRRI
RDVFVVGEGYESLMSADYSQIEMRIMAHLSGDAGLIEAFRTGEDLHRFVGARVFAVQPEA
VTLEMRSKVKAMSYGLAYGLSAFGLSKQLTISTAEAQGLMDDYFARFGGVRDYLREVVAQ
ARATGFTSTMLGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKLAMKGVHGALQ
AEGARSRMLLQVHDELVLEVAPGEREDVEALLRREMGAAAELDVPLDVSVGVGRSWHDAA
H
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgctcgttaggctgccacgcgtgaagctcctcctcctcgacggacactcgctggcctac
cgcgcgttctacgcgcttcccgtcgagaacttctcgacgagcaccgggcagcacaccaac
gccgtctacggcttcaccgcgatgctcatcaacgtcctgcgcgacgaggccccgacccac
gtcggggtggcgttcgacgtctcgcgcgagaccttccgcctgcgggagtacagcgagtac
aaggccgggaggtcggcgacgccctcggagttctccggccagctccccctcctgcgcgag
gtgctcgacgcgctgcggatccggcacgtcggcctgccggggttcgaggccgacgacgtc
atcgcctcgctcacccggcaggcggtcgaggcggggggcgaggtcgtcgtgtgcaccggc
gaccgcgacgccttccagctcgtctcggaccgggtcaccctcctgtacccggtgcggggg
gtctccgaggtgtggcggatggacccggccgccgtcgaggagcgctacctcgtgccaccg
cagcgctacagcgacctcgccgcgctcgtcggcgagacgagcgacaacctgccgggcgtg
cccggcgtgggtccgaagaccgccgcgaagtggctgggccgctacggcgacctcgccggt
gtcgtggcgcacgtcggcgagatcggcggcaaggccggggagaacctgcgtgcccacctc
gacgacgtgctgcgcaaccgccgcctcaaccggctcgtcgacgacctcgacctcccgctg
tcggtcgaggagctcgagcgctcctcgtgggaccgcgaggaggtccaccgggtcttcgac
ggcctcgagttccgggtgctgcgcgagcggctcttccagaccttcgaggtcgagtccgac
gaggtcgagggcgggttcgacgtcggcgaggccgtgttcaccgccgacgacctcgaggca
cgcttcggcgagggcggggtcggacgcacggtgacccacggggtcgtcgtctccgggcag
taccgcgcggccgagggcgacgccaccgccgtggccctggccggtgaggacggcgccacc
gcctccctcgacctggccaccctcacccccgagcaggagcggctgctcgccggctggctg
gccgaccccgcggcgcccaaggtgctgcacgacgccaagccgcagctccaggcgctctcc
acgcggggcctggccctgcgcggcgtggtgagcgacaccgcgctggctgcctacctcgtc
cgccccgaccagcgctcctacgacctcgaggacctcgtcgtgcgccacctcggccgcgag
ctgagcgccgagggcgacgccacgagcgaccagggtcgccaggggacgctcgacttcgac
gccgaggacggctccgcgcagcgcgacgcgatggtgcgggcccgggcggtgctggagctg
tccgaggcgctcgccgagaaggtcgaggagaccggcgggacggctctgctgcgcgacctc
gagctgcccctggtcgacatcctcgcggagatggagcgcacgggcatcgccgtcgacgag
ggtgcgctgagcgccctcgaggccgacttcgccgggaagatgcgtcaggcccagcaggac
gcctacgacgccatcgggcgcgaggacgtcaacctcggcagccccaagcagctgcaggag
gtgctcttcgaccagctcgacatgcccaagaccaagcgcaccaagacgggctacaccacc
gacgccgacgcgctcgccgacctgtacgtcaagaccgagcaccccttcctcgaggcgctg
ttgcgccaccgcgacaccagccggctgcgggtcaccgtcgaggggctcatcaagtcggtc
gcggccgaccggcgcatccacacgacctacctgcagacgatcgcggcgaccggtcggctc
tcctcgaccgaccccaacctgcagaacgtcccgatccgcaccgaggagggccggcgcatc
cgtgacgtcttcgtcgtgggggagggctacgagtcgctgatgtcggccgactacagccag
atcgagatgcggatcatggcccacctgtccggggacgccgggctcatcgaggcgttccgc
acgggtgaggacctccatcgcttcgtcggggcccgggtcttcgcggtgcagcccgaggcg
gtcacgctcgagatgcgcagcaaggtcaaggcgatgagctacgggctcgcctacgggctc
tcggcgttcgggctgtccaagcagctgacgatctcgaccgccgaggcgcaggggctcatg
gacgactacttcgcccggttcggtggggtgcgcgactacctgcgcgaggtcgtggcgcag
gcccgggccaccggtttcacctcgacgatgctcggccggcgccgctacctgcccgacctc
acgagcgacaaccggcagcgacgcgagatggccgagcggatggcgctcaacgcccccatc
cagggctccgccgcggacatcatcaagctcgcgatgaagggcgtccacggcgcgctgcag
gccgagggcgctcgtagtcggatgctcctccaggtgcacgacgagctcgtcctcgaggtc
gcccccggggagcgggaagacgtggaggccctgctgcgccgggagatgggcgccgcggcc
gagctggacgtgccgctcgacgtcagcgtcggggtcgggcgcagctggcacgacgccgcg
cactga

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