Phycicoccus endophyticus: H9L10_05440
Help
Entry
H9L10_05440 CDS
T06776
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pei
Phycicoccus endophyticus
Pathway
pei03030
DNA replication
pei03410
Base excision repair
pei03420
Nucleotide excision repair
pei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9L10_05440 (polA)
03410 Base excision repair
H9L10_05440 (polA)
03420 Nucleotide excision repair
H9L10_05440 (polA)
03440 Homologous recombination
H9L10_05440 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pei03032
]
H9L10_05440 (polA)
03400 DNA repair and recombination proteins [BR:
pei03400
]
H9L10_05440 (polA)
Enzymes [BR:
pei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9L10_05440 (polA)
DNA replication proteins [BR:
pei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H9L10_05440 (polA)
DNA repair and recombination proteins [BR:
pei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H9L10_05440 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L10_05440 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QNN50448
UniProt:
A0A7G9R4C3
LinkDB
All DBs
Position
1118783..1121488
Genome browser
AA seq
901 aa
AA seq
DB search
MLVRLPRVKLLLLDGHSLAYRAFYALPVENFSTSTGQHTNAVYGFTAMLINVLRDEAPTH
VGVAFDVSRETFRLREYSEYKAGRSATPSEFSGQLPLLREVLDALRIRHVGLPGFEADDV
IASLTRQAVEAGGEVVVCTGDRDAFQLVSDRVTLLYPVRGVSEVWRMDPAAVEERYLVPP
QRYSDLAALVGETSDNLPGVPGVGPKTAAKWLGRYGDLAGVVAHVGEIGGKAGENLRAHL
DDVLRNRRLNRLVDDLDLPLSVEELERSSWDREEVHRVFDGLEFRVLRERLFQTFEVESD
EVEGGFDVGEAVFTADDLEARFGEGGVGRTVTHGVVVSGQYRAAEGDATAVALAGEDGAT
ASLDLATLTPEQERLLAGWLADPAAPKVLHDAKPQLQALSTRGLALRGVVSDTALAAYLV
RPDQRSYDLEDLVVRHLGRELSAEGDATSDQGRQGTLDFDAEDGSAQRDAMVRARAVLEL
SEALAEKVEETGGTALLRDLELPLVDILAEMERTGIAVDEGALSALEADFAGKMRQAQQD
AYDAIGREDVNLGSPKQLQEVLFDQLDMPKTKRTKTGYTTDADALADLYVKTEHPFLEAL
LRHRDTSRLRVTVEGLIKSVAADRRIHTTYLQTIAATGRLSSTDPNLQNVPIRTEEGRRI
RDVFVVGEGYESLMSADYSQIEMRIMAHLSGDAGLIEAFRTGEDLHRFVGARVFAVQPEA
VTLEMRSKVKAMSYGLAYGLSAFGLSKQLTISTAEAQGLMDDYFARFGGVRDYLREVVAQ
ARATGFTSTMLGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKLAMKGVHGALQ
AEGARSRMLLQVHDELVLEVAPGEREDVEALLRREMGAAAELDVPLDVSVGVGRSWHDAA
H
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttaggctgccacgcgtgaagctcctcctcctcgacggacactcgctggcctac
cgcgcgttctacgcgcttcccgtcgagaacttctcgacgagcaccgggcagcacaccaac
gccgtctacggcttcaccgcgatgctcatcaacgtcctgcgcgacgaggccccgacccac
gtcggggtggcgttcgacgtctcgcgcgagaccttccgcctgcgggagtacagcgagtac
aaggccgggaggtcggcgacgccctcggagttctccggccagctccccctcctgcgcgag
gtgctcgacgcgctgcggatccggcacgtcggcctgccggggttcgaggccgacgacgtc
atcgcctcgctcacccggcaggcggtcgaggcggggggcgaggtcgtcgtgtgcaccggc
gaccgcgacgccttccagctcgtctcggaccgggtcaccctcctgtacccggtgcggggg
gtctccgaggtgtggcggatggacccggccgccgtcgaggagcgctacctcgtgccaccg
cagcgctacagcgacctcgccgcgctcgtcggcgagacgagcgacaacctgccgggcgtg
cccggcgtgggtccgaagaccgccgcgaagtggctgggccgctacggcgacctcgccggt
gtcgtggcgcacgtcggcgagatcggcggcaaggccggggagaacctgcgtgcccacctc
gacgacgtgctgcgcaaccgccgcctcaaccggctcgtcgacgacctcgacctcccgctg
tcggtcgaggagctcgagcgctcctcgtgggaccgcgaggaggtccaccgggtcttcgac
ggcctcgagttccgggtgctgcgcgagcggctcttccagaccttcgaggtcgagtccgac
gaggtcgagggcgggttcgacgtcggcgaggccgtgttcaccgccgacgacctcgaggca
cgcttcggcgagggcggggtcggacgcacggtgacccacggggtcgtcgtctccgggcag
taccgcgcggccgagggcgacgccaccgccgtggccctggccggtgaggacggcgccacc
gcctccctcgacctggccaccctcacccccgagcaggagcggctgctcgccggctggctg
gccgaccccgcggcgcccaaggtgctgcacgacgccaagccgcagctccaggcgctctcc
acgcggggcctggccctgcgcggcgtggtgagcgacaccgcgctggctgcctacctcgtc
cgccccgaccagcgctcctacgacctcgaggacctcgtcgtgcgccacctcggccgcgag
ctgagcgccgagggcgacgccacgagcgaccagggtcgccaggggacgctcgacttcgac
gccgaggacggctccgcgcagcgcgacgcgatggtgcgggcccgggcggtgctggagctg
tccgaggcgctcgccgagaaggtcgaggagaccggcgggacggctctgctgcgcgacctc
gagctgcccctggtcgacatcctcgcggagatggagcgcacgggcatcgccgtcgacgag
ggtgcgctgagcgccctcgaggccgacttcgccgggaagatgcgtcaggcccagcaggac
gcctacgacgccatcgggcgcgaggacgtcaacctcggcagccccaagcagctgcaggag
gtgctcttcgaccagctcgacatgcccaagaccaagcgcaccaagacgggctacaccacc
gacgccgacgcgctcgccgacctgtacgtcaagaccgagcaccccttcctcgaggcgctg
ttgcgccaccgcgacaccagccggctgcgggtcaccgtcgaggggctcatcaagtcggtc
gcggccgaccggcgcatccacacgacctacctgcagacgatcgcggcgaccggtcggctc
tcctcgaccgaccccaacctgcagaacgtcccgatccgcaccgaggagggccggcgcatc
cgtgacgtcttcgtcgtgggggagggctacgagtcgctgatgtcggccgactacagccag
atcgagatgcggatcatggcccacctgtccggggacgccgggctcatcgaggcgttccgc
acgggtgaggacctccatcgcttcgtcggggcccgggtcttcgcggtgcagcccgaggcg
gtcacgctcgagatgcgcagcaaggtcaaggcgatgagctacgggctcgcctacgggctc
tcggcgttcgggctgtccaagcagctgacgatctcgaccgccgaggcgcaggggctcatg
gacgactacttcgcccggttcggtggggtgcgcgactacctgcgcgaggtcgtggcgcag
gcccgggccaccggtttcacctcgacgatgctcggccggcgccgctacctgcccgacctc
acgagcgacaaccggcagcgacgcgagatggccgagcggatggcgctcaacgcccccatc
cagggctccgccgcggacatcatcaagctcgcgatgaagggcgtccacggcgcgctgcag
gccgagggcgctcgtagtcggatgctcctccaggtgcacgacgagctcgtcctcgaggtc
gcccccggggagcgggaagacgtggaggccctgctgcgccgggagatgggcgccgcggcc
gagctggacgtgccgctcgacgtcagcgtcggggtcgggcgcagctggcacgacgccgcg
cactga
DBGET
integrated database retrieval system